Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3216 111 1e-19 >seq3216 Length=359522 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | ||| || ||||| || | ||| || ||||||| ||| ||| |||||||| Sbjct 237105 GTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGCTG 237164 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || | ||||| | | ||||||||| || || ||||| || ||||| | ||| || Sbjct 237165 CTTACCAGCGAAGATAAGACGTTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTT 237224 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||| ||| | | | ||||||| | ||||| |||| |||||||||||||| || Sbjct 237225 ACTCTTCACGTTGTCAATAGTGTCACTGGACTCGACCTCAAGGGTGATGGTTTTTCCGGT 237284 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || |||||||| Sbjct 237285 GAGAGTCTTAACGAAAATCTGCAT 237308 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| ||||| || | ||| ||||| | ||| | ||||| ||||| Sbjct 237843 GTGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCCTCAAGCTG 237902 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 || || ||||||| || | |||||| || || ||||| || || ||||| | ||| || Sbjct 237903 CTTGCCAGCAAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTT 237962 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 | ||||||| | ||| |||||| | || || || | |||||||| || || || Sbjct 237963 GGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 238022 Query 94984 AAGAGTTTTCACAAAGATCTGCATG 95008 | || || || |||||||||||| Sbjct 238023 CAAGGTCTTGACGAAGATCTGCATG 238047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448270326441000