Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3216 95.1 1e-14 >seq3216 Length=359522 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | |||||||| | ||||| | ||||||||| | | Sbjct 237536 ATGCAAATCTTCGTCAAGACCCTCACTGGAAAGACCATTACTCTGGAAGTCGAGTCATCC 237477 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || |||||| ||||| || || || |||||||||||| Sbjct 237476 GATACCATTGATAATGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCCGATCAA 237417 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| |||| || | | ||||||||||| || || | | ||| | ||| || ||| Sbjct 237416 CAGCGACTCATCTTTGCTGGCAAGCAACTTGAGGACGGCCGAACTCTTTCCGACTACAAC 237357 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || |||||||| Sbjct 237356 ATCCAGAAGGAATCTAC 237340 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || || |||| || ||| | |||||| ||||| | ||||| | Sbjct 237740 ACTGGCAAGACTATCACTCTCGAGGTTGAGTCATCCGACACTATCGACAATGTCAAGTCA 237681 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| || ||||| ||||| ||||| ||| | ||||| | | |||||| Sbjct 237680 AAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGCGCCTGATCTTTGCTGGCAAG 237621 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 ||||| || || | | ||| | || ||| || |||||||| || |||||||| ||||| Sbjct 237620 CAACTTGAGGACGGCCGAACCCTCGCCGACTACAACATTCAGAAGGAATCTACCCTTCAT 237561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429916481577375