Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2635 215 7e-51 >seq2635 Length=144039 Score = 215 bits (238), Expect = 7e-51 Identities = 628/957 (66%), Gaps = 14/957 (1%) Strand=Plus/Minus Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811 ||| || || || || || || ||||| | || | ||| | || || |||||||| Sbjct 61194 AGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCGATAATTTCAGTGCA 61135 Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871 || ||| | |||||| || | || | ||| || ||||| ||| || ||||| Sbjct 61134 CAGGTTAGAGCTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATC 61075 Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931 ||| || || ||||| || | ||||| ||| |||||| || | ||| || | ||| | Sbjct 61074 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAA- 61016 Query 62932 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTC-TCTTTCGTATAGTGTA--TACA 62987 | || ||||||| || || ||| | ||| | || ||| ||| | | |||| Sbjct 61015 GCTTCTGAGCCTTGAT---AGTCTTGCGACCCTTGCCCTCCTTCTCATACTTTTCGTACA 60959 Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047 |||||||| || || | | | | || ||||| || || | || ||||||| Sbjct 60958 GAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCA 60899 Query 63048 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63107 | ||| || |||| | | || || |||||||| |||||||| |||||||| || | Sbjct 60898 GTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGGCGA 60839 Query 63108 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63167 || || || | || | ||||| || || |||||| ||||| |||||| Sbjct 60838 GGAACAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTTCGGAGATCAAGGAACT 60779 Query 63168 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63227 | | | |||||| ||||| || || | ||| ||||| | | | || || || ||||| | Sbjct 60778 CGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGC 60719 Query 63228 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 63287 | |||||||| | || | ||| ||||| || | || | | ||| |||| || || | Sbjct 60718 CACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACGCCGT 60659 Query 63288 TGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATA--TTACTAATTGA 63345 |||||||||| ||||| || | ||| ||| ||| | ||||| ||| | | || Sbjct 60658 TGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGGATACGGTGCACGTT-- 60601 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 ||||| || || || ||||| || ||||| | || || || | ||||| ||||| Sbjct 60600 CAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 60541 Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 63465 |||||| ||||| || ||| |||| | || | || || |||| |||| | || Sbjct 60540 GCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGG 60481 Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 || || || || || | || ||||| || || ||||| |||| || | || || Sbjct 60480 GGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGGACATCAGGTT 60421 Query 63526 GTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTA 63584 || ||||| | || || ||||| || | || || || | |||||||| | Sbjct 60420 ATATGTCTCCAAGACTCGCTCGATATCATCACCCCAG-ATACCAACAGACACACGCATGA 60362 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 |||||||||||| | || || ||||| || || || | | ||||||| |||| Sbjct 60361 TCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCTTGAGGAGGTAGGATCGCTCCA 60302 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701 |||| || || ||||| || | |||| || || || || || | ||| | |||| Sbjct 60301 AAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGCGGAGT 60245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633602496510000