Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3216 95.1 1e-14 >seq3216 Length=359522 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| || ||||| || Sbjct 238046 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 237987 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 237986 GACACTATCGACAACGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATTCCCCCCGACCA 237928 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || ||||| ||||| || | || || | ||||| | |||||||| Sbjct 237927 GCAACGCTTGATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCTGATTACAA 237868 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || || || || Sbjct 237867 CATTCAGAAGGAGTCTACTCTTCA 237844 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 25005 ATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACT 25064 ||| | || ||||| | || || || | ||||| |||| || ||||| || |||||| Sbjct 237758 ATAGTCGTCAAGACCCTCACTGGCAAGACTATCACTCTCGAGGTTGAGTCATCCGACACT 237699 Query 25065 ATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGC 25122 ||||| || || ||| ||| ||| ||||| || || || || ||||| || |||| Sbjct 237698 ATCGA--CAATGTCAAGTCAAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGC 237641 Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182 | | || ||||| ||||| ||| | || || | || || | | ||| ||||| |||| Sbjct 237640 GCCTGATCTTTGCTGGCAAGCAACTTGAGGACGGCCGAACCCTCGCCGACTACAACATTC 237581 Query 25183 AAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| || || ||| | || || Sbjct 237580 AGAAGGAATCTACCCTTCATCTCGTCCT 237553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433308327585875