Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2635 246 3e-60 >seq2635 Length=144039 Score = 246 bits (272), Expect = 3e-60 Identities = 1064/1668 (64%), Gaps = 36/1668 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 60277 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCCTACCTCCTCAAGATTGACGGTAAG 60336 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 60337 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 60396 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | | ||| ||| | ||| |||| || | Sbjct 60397 ATCGAGCGAGTCTTGGAGACATATAACCTGATGTCCAGCAAATTCTTTACACATG-CCTC 60455 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 || || || |||||||| || ||||| ||| || |||| || || ||| || | Sbjct 60456 TCCCACACTCTTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGA 60515 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || || || | ||| | |||||| |||||| | ||||| Sbjct 60516 TATGAAGGACGACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTC 60575 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | || ||| |||| ||||| | || |||||| Sbjct 60576 CAAGATGGCTGGAGGTATTGGTCTGAACGTGCAC--CGTATCCGTGCTACTGGCTCCTAC 60633 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || || ||||||||| | || |||||||| || |||||||||||| Sbjct 60634 ATCGCCGGTACCAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAAC 60693 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || ||||| || || |||||||| | | | ||| |||| || |||| ||| Sbjct 60694 ACTGCTCGCTATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 60753 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | ||| | || || |||||||||||||| || || Sbjct 60754 GAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAAGAG 60813 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||||| ||| ||| || ||| | || || ||||||||||| || Sbjct 60814 GAGGTCCGTGCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGT 60873 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| | ||||| || | || ||||| || || || || || ||||| Sbjct 60874 GTTGAAAAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGAC 60933 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | || | || || | |||| | || || | ||||||||| | Sbjct 60934 TGCTACGGTGAGGAGTTCGAGGCTCTGTACGAAAAGTATGAGAAGGAGGGCAAGGGTCGC 60993 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| ||| | ||| |||||| ||| || || | || | ||| ||||| || Sbjct 60994 AAGACTATCAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGA 61053 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | || | ||| | | |||||| | |||| |||| |||||| || ||||||| Sbjct 61054 AACCCTTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGC 61113 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||| ||||| || |||||||| || ||| |||||||| | | || |||||| | Sbjct 61114 ACCATCCGAAGCTCTAACCTGTGCACTGAAATTATCGAGTATTGTGCCCCTGACGAGGTC 61173 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGTC 94673 ||||| || ||||| | ||| | ||| | | ||| | | | |||| | | Sbjct 61174 GCTGTCTGCAACCTTGCCTCTCTGGCTCTGCCTTCCTTCAT-CAA-----CTACGATGAG 61227 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT--GAA 94730 |||| | ||| | || || || || | | | ||| || | || || Sbjct 61228 GCCTGC----TACGACTTCAAGAAG---TTGCACGAGGTCAGTCAGGTTGTTATTCGCAA 61280 Query 94731 CCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCT 94790 |||||||| | | |||||| |||| |||||| ||||||||||| ||| ||| | Sbjct 61281 CCTGAACAAGATCATCGACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGCAACAT 61340 Query 94791 GAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCG 94850 | || || ||||| || |||| || ||||| | || || || | | |||| Sbjct 61341 GCGCCACCGACCCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTGCG 61400 Query 94851 TCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTA 94910 |||||| ||| || ||| || | | || | | || ||||| | ||| || Sbjct 61401 CATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTA 61460 Query 94911 TTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATC 94970 ||| ||| | | ||||| || |||||| ||| | || || || | Sbjct 61461 CCACGCTGCCCTCACTGCCTCCGTGCAGCTGGCCA---AGGAGGAGGGTCCCTACTCCAC 61517 Query 94971 GTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 ||| || || ||| |||| || | ||||||||| | ||| || ||||| Sbjct 61518 CTTCAAGGGCTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCC 61577 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 ||| | || | |||||||| |||| || | || || | | ||||||| | || Sbjct 61578 CTCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGTATCCGTAA 61637 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| | || || ||||| || ||| || | ||||| || ||||||||||| Sbjct 61638 CAGTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGA 61697 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| |||| |||||||||| | ||| | | || || ||||| || || |||| Sbjct 61698 GTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCA 61757 Query 95211 CGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| || || ||||| || || | ||||| ||||| || Sbjct 61758 GGTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTA 61816 Query 95270 TCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325 | ||||||| | |||| | || || ||| | |||||||| || | || || Sbjct 61817 TGAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCT 61872 Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || ||||||| || || ||||| || |||||||| | |||||| Sbjct 61873 GCCGATGTCAAGGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGC 61920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700164451000