Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2635 284 2e-71 seq524 210 4e-49 >seq2635 Length=144039 Score = 284 bits (314), Expect = 2e-71 Identities = 850/1281 (66%), Gaps = 53/1281 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||||||||||||||| |||||| ||||||||| ||| | |||||||| Sbjct 61475 GTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 61417 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || ||||||||| ||||| | | ||||| | || || || ||||| || |||| | Sbjct 61416 TGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCAGCAAGGCCCTGAACACCGAGA 61359 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 || ||||| | ||| | | ||||| | ||| || || || || || || ||| | Sbjct 61358 CCAATGGGTCGGTGGCGCATGTTGCTGTTGCGA--GCCTCCGGGACAGGGTAGTGGTTCA 61301 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 ||||||| | ||||| ||||| || | | || | | |||||| || ||||| Sbjct 61300 CGTCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCT--- 61244 Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 |||| | | | | | |||| || | | | || || || || | Sbjct 61243 ---TGAAGTCGTAGCAGGCCTCATCGT--AGTTGATGAAGGAAGGC----AGAGCCAGAG 61193 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 ||| ||||| || || || |||||||| | ||||| || || || || || | Sbjct 61192 AGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCGATAATTTCAGTGCACA 61133 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 |||| || |||||| || |||| || || || |||||| ||| || |||| Sbjct 61132 GGTTAGAGCTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCT 61073 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||||||||| || || |||||||| ||||||| | ||||| | ||| || | Sbjct 61072 TGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAGCT 61013 Query 221892 CTCTG-GCGCTCACCGTCCTCTTGAC---TGCACCCTCGGTCTTTTCATACCCG--GTAT 221945 |||| || | | ||| | ||| ||| |||| ||| |||||| ||| Sbjct 61012 -TCTGAGCCTTGATAGTCTTGC-GACCCTTGC--CCTC---CTTCTCATACTTTTCGTAC 60960 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| | | |||| |||||||| ||| | ||||| || ||| | ||| |||| Sbjct 60959 AGAGCCT--CGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACA 60902 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065 |||| |||||| ||| | || || | || ||| || || || |||||||| || | Sbjct 60901 TCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGG 60842 Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125 | | || || || | || || |||||| |||| ||| || | ||||| | | Sbjct 60841 CGAGGAACAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTTCGGAGATCAAGGA 60782 Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185 |||| || | |||| |||||| ||||| || |||| ||| | ||| ||||||||||||| Sbjct 60781 ACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGT 60722 Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244 ||||||||||||| | ||| ||| | |||||||| ||||| | || || | Sbjct 60721 TGCCACCCTGATCGA-CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACG 60663 Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GC 222303 ||||||||| ||||||||| || ||||| | || || | || ||| | || Sbjct 60662 CCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCAC---GGATACGGTGC 60606 Query 222304 A--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 | || || ||||| || || || ||||||||||| ||| |||||||||| || Sbjct 60605 ACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCG 60546 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||||||| ||| ||| ||||| | | | || || ||||| |||| || | Sbjct 60545 TAGATGCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC 60486 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | | || || ||||| || || |||||| ||| ||||||||| | || |||||| Sbjct 60485 TGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGGACATC 60426 Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATC 222539 || | || ||||| | ||||| |||| | || ||| || | | || | | || | Sbjct 60425 AGGTTATATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA-GACACA-C 60368 Query 222540 TCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGA 222597 |||| ||||| ||| || | ||| ||| || | | || ||| ||||| || Sbjct 60367 GCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT--TGAGGAGGTAGGA 60310 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657 | |||| ||||||||| |||||||| | | | || || | | | | || | ||| Sbjct 60309 TCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGC 60250 Query 222658 GGCGTCCAGCTCCGACTTGTG 222678 || ||||| |||| |||||| Sbjct 60249 GGAGTCCAACTCCTCCTTGTG 60229 Score = 96.9 bits (106), Expect = 6e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||| || | | |||||| | ||| || ||| | || Sbjct 61767 GTTGACAACCTGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 61708 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||||||||||| ||||||| || ||||| || ||||| || || | Sbjct 61707 CTCGAAGCACTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAG 61648 Query 221236 CAGCAGACTGTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACA 221295 ||||||||||| || | ||| | | |||| || || || || | |||||| || Sbjct 61647 GAGCAGACTGTTACGGATACCGTGTGTCTTGACTTCCTCTCGAAGAGTCTCCCAGTCCCA 61588 Query 221296 G 221296 | Sbjct 61587 G 61587 >seq524 Length=29470 Score = 210 bits (232), Expect = 4e-49 Identities = 401/587 (68%), Gaps = 13/587 (2%) Strand=Plus/Minus Query 25463 TAACACACAAAGATATAT--GGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGC 25520 ||||| || | |||| || || | ||||||||||||||| | || |||||| || Sbjct 3285 TAACAGACCATGATAGATCTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGC 3226 Query 25521 CGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACG 25576 ||| ||||||||||| ||||||| | ||| |||| || || || | || | Sbjct 3225 CGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCCGATG 3167 Query 25577 AGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACG 25636 ||||| || || || | | || ||||| || |||||||||||||| || |||| Sbjct 3166 AGCAGTTCTTCGTCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATTGTCAACG 3107 Query 25637 AGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACG 25696 |||| || ||| |||||| | || || ||| | ||||| |||||||||| Sbjct 3106 AGAACCTCGTTGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACG 3047 Query 25697 GTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---A 25753 | |||||||| || || || | ||||||||| || || ||||| || | Sbjct 3046 GCTTCCAGATCATGATGGAGAACATCCACTCTGAGACCTACTCC---CTTCTCATTGACA 2990 Query 25754 CGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCA 25813 | ||||| | || |||| || || || || ||||| ||| ||| || Sbjct 2989 CCTACATCAAGGAGCCCGCCCAGCGAACCTACCTCTTCAACGCCATTGAGACCATTCCTT 2930 Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873 ||||| | |||||| |||||||| |||||| | || | | | |||| Sbjct 2929 GCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTG 2870 Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933 | |||| || || ||||| |||||||| ||||| ||||| ||||||||| | ||||| Sbjct 2869 CCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCT 2810 Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993 | ||||||||||||||| || || ||||||||| ||| ||| ||||||||||||| Sbjct 2809 CTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCA 2750 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 || | || ||||||||||||| || ||||||||||| ||| || Sbjct 2749 TCTCTCGTGATGAGGGTCTCCACACTGACTTTGCCTGCCTCCTCCAC 2703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928801550664000