Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2635 194 5e-44 seq524 145 2e-29 seq497 107 6e-18 seq2691 89.7 2e-12 seq95 86.0 2e-11 >seq2635 Length=144039 Score = 194 bits (214), Expect = 5e-44 Identities = 578/880 (66%), Gaps = 19/880 (2%) Strand=Plus/Minus Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 || || | ||| ||| |||||||||||| || ||||||||| | ||||| ||||| Sbjct 61154 TACTCGATAATTTCAGTGCACAGGTTAGAGCTTCGGATGGTGCCGAGGTTCTTTTGGTTG 61095 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 || | ||| || ||||||||||| || ||| | ||| |||| ||||| |||| || Sbjct 61094 CTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCC 61035 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || ||||| ||| || | | || || || |||| |||| ||| | Sbjct 61034 TCAAGAATGGCATACCAAAGCTTCTGAGCCTTGATAGTCTTGCGACCCTTGCCCTCCTTC 60975 Query 155811 TCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||||| |||| || | ||| | | | ||||||||||| || || || ||||||| Sbjct 60974 TCATACTTTTCGTACAGAGCCTC--GAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGC 60917 Query 155869 ACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAATA 155925 ||| | |||||| | ||| | ||| | || || | | |||||| |||||| | Sbjct 60916 ACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAA---CACGCTTCATAAAAA 60860 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 |||| ||||| || ||| ||||| | || |||||| | ||||| | Sbjct 60859 GATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCTTTACCGTGGT 60800 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || || || | ||| || | ||||| || ||||| || || || |||| Sbjct 60799 TCTTTCGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAA 60740 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 || ||| | |||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct 60739 AAGCACCGGGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAGACAC 60680 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 |||||||||| || || ||||| || || ||||| ||| || | || |||| | Sbjct 60679 GAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAG 60620 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCAT 156221 || | | || | | || |||||||| || | |||| || || || || || Sbjct 60619 CACGGATACGGTGCACGTTCAGACCAATACCTCCAG-CCATCTTGGAGATCATGGCACAG 60561 Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGCA 156280 ||| | ||||| | | || || |||||| || || | ||| | | ||| |||| Sbjct 60560 GTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCAACCAAGA-AGCA 60502 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 || ||||| || | || || ||||||||||| ||||| || | ||||| |||| Sbjct 60501 AGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAA 60442 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTA-GACCCGTGAA 156399 | || | ||||| | ||||||||| | ||| | || | |||| | | Sbjct 60441 GAATTTGCTGGACATCAGGTTATATGTCTCCAAGACTCGCTCGATATCATCACCCCAG-A 60383 Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTC 156459 ||| | ||| || | ||| ||| |||||||| ||||| |||||| || ||||| Sbjct 60382 TACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT 60323 Query 156460 GCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || ||||| | || |||| ||| || || || || || Sbjct 60322 TGAGGAGGTAGGATCGCTCCAAAGTCTTGAAGCCAAAGTA 60283 >seq524 Length=29470 Score = 145 bits (160), Expect = 2e-29 Identities = 246/354 (69%), Gaps = 2/354 (1%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || ||| || || || | ||||| |||||| || ||||| ||| || | Sbjct 3067 CCGAGGCTCGTTGTTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCTGAGACCT 3008 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424 | || ||| ||||| || |||||||| || ||| |||| | | || ||||||| Sbjct 3007 ACTCCCTTCTCATTGACACCTACATCAAGGAGCCCGCCCAGCGAACCTACCTCTTCAACG 2948 Query 133425 CCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAG 133483 ||||| | || ||||||| || |||||| | |||||||| || |||||||||| Sbjct 2947 CCATT-GAGACCATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAG 2889 Query 133484 GACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttt 133543 || ||| | ||||| ||||||||||| || |||| || ||||| || || Sbjct 2888 GATAAGGACTCCTCCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTC 2829 Query 133544 ttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603 ||||| ||||| || |||||| || ||||| || ||||||||| | | || || ||| Sbjct 2828 TTCAGCGGTGCCTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTG 2769 Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 || || ||||| || || || | || |||| || ||||| || |||||| Sbjct 2768 ACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCC 2715 >seq497 Length=94808 Score = 107 bits (118), Expect = 6e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | ||| || ||||| | | ||||||| || | ||| | || || Sbjct 66900 ATGAGTCCACAGATCTCACAGACGTGGACACGGAAAGCATCCGACACCTCAAACAGACGC 66959 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || |||||||| | ||||||||||||||| |||||||| ||||| Sbjct 66960 TCCTTCAGGAAAGCAGCGGCACCGTGAGCAATCATACAATCACGTTCCATTTCTCCGAAT 67019 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || ||||||||||| ||||| | ||| ||| |||| || || || Sbjct 67020 CGGAGACCACCATCACGAGCACGACCTTCGACAGGTTGTCGGGT 67063 >seq2691 Length=102173 Score = 89.7 bits (98), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || ||||| | || ||||| |||||||| ||||||||| Sbjct 35569 AGAATTTCCTTGAGACGTGGTACACCGAGTGTAACGTT---CTTGGACGACACACCAGCA 35625 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| || || || || | ||||||| |||||||| ||| ||||| || | Sbjct 35626 AAATGGAAGGTGTTTAGTGTCATCTGAGTAGCAGGCTCACCGATAGACTGTGCAGCCAGA 35685 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 35686 ACACCAACCATTTCACCAGG 35705 >seq95 Length=88013 Score = 86.0 bits (94), Expect = 2e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 251848 GTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCAGCA 251907 ||||| ||| ||| | | | ||||| || ||||| || ||||| ||| |||| || Sbjct 68065 GTCATTCGAGAGGGGAAACCGTGGGGGTTCATGATAATATCGGGGCTCAATCCACTGTCA 68124 Query 251908 GTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATAGTTCCCTTTTGTCCGTGACGA 251967 | |||||||| ||||| || ||||| ||| | |||| |||||||| ||||||||| Sbjct 68125 GAGAAGGGCAAATCCTCTTGCTCAACAATAATACCAACGACACCCTTTTGACCGTGACGA 68184 Query 251968 GAACTGAACTTATCACC 251984 || |||||| ||||| Sbjct 68185 GACGAGAACTTGTCACC 68201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471747355205325