Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3216 100 7e-16 >seq3216 Length=359522 Score = 100 bits (110), Expect = 7e-16 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTC--TGACACAGTCGAAT 206242 || || ||||| |||||||| ||||| | || || || || | |||||| | || Sbjct 237293 AAGACTCTCACCGGAAAAACCATCACCCTTGAGGTCGA--GTCCAGTGACACTATTGACA 237236 Query 206243 CAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||| |||||||| || || || || || || || ||| | ||||||| Sbjct 237235 ACGTGAAGAGTAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAGCAACGTCTTATCT 237176 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||| || |||||| |||||||||| | || || ||| |||||| ||||||| |||| Sbjct 237175 TCGCTGGTAAGCAGCTGGAAGATGGTCGCACCCTGAGCGACTACAACATCCAGAAGGAGT 237116 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390 | ||||| ||||| ||| | ||||||| Sbjct 237115 CAACTCTCCACCTCGTTCTCCGACTTCG 237088 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | ||| ||||| ||||| ||||| ||||||| || ||||| || || Sbjct 237088 CGAAGTCGGAGAACGAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTG 237147 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||||||||| || ||||||||||| ||||| ||| Sbjct 237148 CGACCATCTTCCAGCTGCTTACCAGCGAAGATAAGACGTTGCTGA 237192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181764395755725