Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2635 253 2e-62 seq524 138 1e-27 >seq2635 Length=144039 Score = 253 bits (280), Expect = 2e-62 Identities = 1146/1789 (64%), Gaps = 53/1789 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||| | | ||||| || || || || || || Sbjct 60348 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 60407 Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338 |||||||||||| || ||||||| ||| | | | || || || | || || ||| Sbjct 60408 CTTGGAGACATATAACCTGATGTCCAGCAAATTCTTTACA--CATGCCTCTCCCACACTC 60465 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| |||||||| || |||||| |||| ||||||| | | | | ||||| Sbjct 60466 TTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 60525 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 60526 GACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 60585 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || |||||||| || || | || | | | || | | ||| || ||| || | Sbjct 60586 GGAGGTATTGGTCTGAACGTGCACCGTATCCGTGCTACTGG--CTCCTACATCGCCGGTA 60643 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| ||| | || || |||| |||||||| || || ||| ||| || |||| Sbjct 60644 CCAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCT 60703 Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 |||| |||| | ||| ||| || || | || |||| || ||||| |||| Sbjct 60704 ATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 60763 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 || | ||| || | ||||||||||| | || ||||| ||| | ||||||| || Sbjct 60764 ACTCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAAGAGGAGGTCCGTG 60823 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || || ||| ||| || ||||| || ||||| || |||||| | ||||| ||| Sbjct 60824 CCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAAGA 60883 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 || | ||| | || | || || || || ||||| ||| |||| | |||| Sbjct 60884 ACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGTG 60943 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 ||||||| || || || ||| |||||| ||| ||| ||| | | | | || | | Sbjct 60944 AGGAGTTCGAGGCTCTGTACGAAAAGTATGAG-AAGGAGGGCAAGGGTC-GCAAGACTAT 61001 Query 104874 CA--GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 || ||| | || | | ||| | || ||||| || |||| || |||||||| | || | Sbjct 61002 CAAGGCT-CAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAAACCCTT 61060 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || ||||| |||| ||||| || |||||||| | || ||| Sbjct 61061 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGCACCATCC 61120 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || || || || || || ||||| | || | | | | || ||| ||||| | Sbjct 61121 GAAGCTCTAACCTGTGCACTGAAATTATCGAGTATTGTGCCCCTGACGAGGTCGCTGTCT 61180 Query 105051 GTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGAT-CCAGAGACAAAG 105100 | ||||| || || | ||||| || ||| || | || || | || | Sbjct 61181 GCAACCTTGCCTCTCTGGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGCTAC---G 61237 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 || || | | || | ||||| || | | ||| | ||||| |||| Sbjct 61238 AC--TTCA-----AGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAG 61290 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | || || || ||||| || | ||||| || || ||| | ||||| Sbjct 61291 ATCATCGACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGCAACATGCGCCACCGA 61350 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279 || |||||||||||||||||||| || || |||| ||| || || || ||| | || Sbjct 61351 CCCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTT 61409 Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 || || ||| || || |||| || || || |||||||| || ||||| || Sbjct 61410 CGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGC 61469 Query 105340 TCTTGAGGCGA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397 || || || ||| |||| ||| || ||||| || ||||| |||| Sbjct 61470 CCTCACTGCCTCCGTGCAGC--TGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGC 61527 Query 105398 TCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC 105457 ||||| || || | || | || || || || |||||| | | || || | | Sbjct 61528 TCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTC 61587 Query 105458 TACGACTGGGAAGCTCT-CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | |||||||| |||| | || | | | ||||| | ||| | ||||||||||| | Sbjct 61588 TGGGACTGGGAGACTCTTCGAG--AGGAAGTCAAGACACACGGTATCCGTAACAGTCTGC 61645 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 || | ||||| ||||| || ||| ||| | || || |||| || || || ||||| | Sbjct 61646 TCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTCG 61705 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 | |||||||| | |||||||| | | || | |||||| || ||||| | |||||| Sbjct 61706 AGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTCA 61765 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 || || | | ||||| || || ||||| |||||| | | ||||||| | | Sbjct 61766 ACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACC 61825 Query 105696 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755 ||| | | | |||||||||||| || ||| | || || || | ||| Sbjct 61826 GCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGG 61885 Query 105756 AGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATC 105815 |||| || |||||||| || | | ||| || | |||||||| || | Sbjct 61886 CTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTGACC 61945 Query 105816 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGAT 105873 | ||| ||||||||||| |||| ||| |||| || |||| | || ||||| Sbjct 61946 GAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGAT 62003 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGT 105932 | |||| || | ||||||| | | || | |||||| |||||||| || || |||| Sbjct 62004 GGGCAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGTCTCAAGACCGGCATGT 62062 Query 105933 ATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 | ||||| || | |||| || || |||||||||| | |||| Sbjct 62063 ACTACCTTCGCACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 62111 >seq524 Length=29470 Score = 138 bits (152), Expect = 1e-27 Identities = 178/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || |||| || || | |||||| || || ||||| || Sbjct 2957 CTCTTCAACGCCATTGAGACCATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGA 2898 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | | || | | | | ||||||| |||| ||| | || || || |||||| Sbjct 2897 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGA 2839 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||| ||| |||| | |||| | |||||||||||||| |||||||| Sbjct 2838 GGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 2779 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||| || || ||||||||||||||| ||||||||||| ||||| |||||| || || Sbjct 2778 GCCCGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTT 2719 Query 94953 TGC 94955 ||| Sbjct 2718 TGC 2716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583233641919000