Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234205.1_202017-07-27] 3,725 sequences; 54,401,289 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2635 206 4e-48 >seq2635 Length=144039 Score = 206 bits (228), Expect = 4e-48 Identities = 439/650 (68%), Gaps = 4/650 (1%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATA 76609 ||||| || || || || ||||||| || ||| ||||| | | | ||| || |||||| Sbjct 60923 CCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATA 60864 Query 76610 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCT 76669 || |||||||| ||||| || || | || || || |||| | || || || || Sbjct 60863 AAAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCTTTACCG 60804 Query 76670 GTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 76729 |||||| ||||| |||||||| | | |||||| ||||| || || || || || Sbjct 60803 TGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATG 60744 Query 76730 GCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAA 76789 || | | |||| ||||| || || || |||||||| | ||| | |||||||| || | Sbjct 60743 GCAAAAGCACCGGGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCAGTGTTGTTGAAG 60684 Query 76790 ACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCA 76849 || | | ||| |||| || |||||| |||||||| || || || | || || ||| Sbjct 60683 ACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCA 60624 Query 76850 CATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCA 76909 ||||| ||| | || || || ||||| ||||| || ||||| | ||| Sbjct 60623 GTAGCACGGATACGGTGCACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCATGGCA 60564 Query 76910 CAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAA-GAAGAAA 76968 ||| || | || || ||||||||||| ||||| || ||| |||| | || ||||| Sbjct 60563 CAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAG 60504 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 || | |||| ||| | ||| || || || || || | ||| ||||| ||||| || Sbjct 60503 CAAGAT-GACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGT 60445 Query 77029 GAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGAT 77087 || |||| || | || || ||||| || | ||| || ||||| || Sbjct 60444 AAAGAATTTGCTGGACATCAGGTTATATGTCTCCAAGACTCGCTCGATATCATCACCCCA 60385 Query 77088 GAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTA 77147 | || || |||| |||||||| | ||| |||||||| || || ||| ||||| | | Sbjct 60384 G-ATACCAACAGACACACGCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAA 60326 Query 77148 TTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 77197 | || | | ||| ||| |||||||| || || ||||| || | |||| Sbjct 60325 TCTTGAGGAGGTAGGATCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTAT 60276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712901203992000