Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2855 145 2e-29 seq2134 93.3 9e-14 >seq2855 Length=139020 Score = 145 bits (160), Expect = 2e-29 Identities = 317/467 (68%), Gaps = 6/467 (1%) Strand=Plus/Minus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||||||||| |||| | |||||| ||||| || | ||| | || | Sbjct 125978 TCCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTAT-CT-TCTTCAGCGGTG 125921 Query 230229 TTTCTGCGCC-ATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | ||| | ||||| ||||| ||| ||| | ||||| ||||| | || | Sbjct 125920 CCTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCA 125861 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| || ||||||||||| | || | | || | | || Sbjct 125860 ACGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCCTGCCTCCTCCACTCTC 125801 Query 230348 AGCTCCAGAA-CAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAA 230406 | ||| || | || | || | ||| | || | | ||||| || || || || Sbjct 125800 ACCTCAAGGGTCGTGCCAGCAAGC-AGATGATCCAGGACATCATCACTGATGCCGTCACC 125742 Query 230407 AACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAA 230466 | || |||||||| | ||| ||| | || ||| |||| | ||||||||| |||| Sbjct 125741 ATTGAGCAGGAGTTCCTCACTGAGGCTCTCCCCTGTGCCCTTCTCGGCATGAACTCTGAC 125682 Query 230467 CTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526 || ||| ||||| || || ||||| ||||| || | ||||||| ||||| ||||| Sbjct 125681 CTCATGAAGCAGTATATTGAGTTCGTCGCCGATCGTCTCCTTGTTGCTCTTGGCAACGAG 125622 Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586 || || ||||| ||| |||||||| | || |||||| ||| || ||| || ||| Sbjct 125621 AAGGTCTACAAGGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAG 125562 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 |||||||||||||| |||||||| ||||| |||| | | ||||| Sbjct 125561 ACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCAGAAGGCCGGTGT 125515 >seq2134 Length=54328 Score = 93.3 bits (102), Expect = 9e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 319812 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACA-TCCGCAGAGGGGAACCCTTCAA 319870 |||||| ||||| || ||| | |||| || | || || || |||| |||||| ||| Sbjct 46805 GTCGAGGTCGTGCTCGACGAAGACAGTCTTGACCTCACTCTGCTTAGGGAAACCCT-CAA 46747 Query 319871 GCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACA 319930 ||| |||| || |||||||| ||||| || || || | ||||| || ||||| | Sbjct 46746 CCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACCGTTGGGACCACAAA 46687 Query 319931 GACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCAC 319990 ||||||| || | || || || || || | || | ||| |||||||| || ||| Sbjct 46686 GACCGTAACGCTGACCACGCTTGAGACGGAGATGGGTCTGGTTGAGAAGAATCTTGGCAC 46627 Query 319991 CATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 | || || ||||| || ||| | || ||||||||||| Sbjct 46626 CGTAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 46587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057774042278180