Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3012 104 5e-17 >seq3012 Length=424931 Score = 104 bits (114), Expect = 5e-17 Identities = 178/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 |||||||| |||||||||| || || ||| |||||||| || || |||||||| Sbjct 43878 CCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATA 43937 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910 || || || | | | | | |||||| || || | |||||| ||| | | ||| Sbjct 43938 CTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC-TGAGGGGTACCAGC 43996 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || || |||||||| || ||||| ||||| | | || ||||| || | |||||| || Sbjct 43997 GTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGGACATCAGGTTATATGTCTC 44056 Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | ||| | ||| || | | || || | || |||| ||||||||| ||||||| || Sbjct 44057 CAAGACTCGCTCGATATCATCACCCCAGA-TACCAACAGACACACGCATGATCATGTGCT 44115 Query 95030 GAGGGCGCTCAAC 95042 |||||||||| || Sbjct 44116 GAGGGCGCTCGAC 44128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989537265040130