Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3012 376 6e-99 >seq3012 Length=424931 Score = 376 bits (416), Expect = 6e-99 Identities = 1129/1707 (66%), Gaps = 62/1707 (4%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||||||||| ||| || | ||| | ||||| || ||||| || Sbjct 44173 AAGACTTTGGAGCGATCCTACCTC-CTCAAGATTGACGGTAAGATTGTCGAGCGCCCTCA 44115 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT 363516 ||| ||| | |||||||| || |||||||| || || || |||| || ||| | Sbjct 44114 GCACATGATCATGCGTGTGTCTGTTGGTATC---TG---GGGTGATGATATCGAGCGAGT 44061 Query 363517 ----GAAACATATAAGCTTCTAAGTGCTCGTGTATTC---ACGCACGCCACGCCAACAAT 363569 || |||||||| || | || | | |||| || || ||| | || ||| | Sbjct 44060 CTTGGAGACATATAACCTGAT--GTCCA-GCAAATTCTTTACACATGCCTCTCCCACACT 44004 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 | ||| ||||| || | | | || || |||| |||||||| | | | |||||||| Sbjct 44003 CTTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGA 43944 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 ||| || ||||| |||| || || || |||| ||||| | || ||||||| || Sbjct 43943 CGACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGC 43884 Query 363690 AGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 || || |||||| | | || | ||| | | ||||| || | | ||||| ||| Sbjct 43883 TGGAGGTATTGGTCTGAACG-TGCACCGTATCCGTGCTACTGG-CTCCTACATCGCCGGT 43826 Query 363748 ACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || || ||| || || || | ||||| ||||||||||| || |||| ||||| | Sbjct 43825 ACCAACGG-TACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCG 43767 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 || ||||| |||||||| ||||| || || ||||| || || ||||||||| Sbjct 43766 CTATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTG 43707 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 || | ||| | || ||||| ||||| ||||| || ||| || |||||||| | || Sbjct 43706 GCACTCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAAGAGGAGGTCCG 43647 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986 ||| ||||| |||||| || |||||| | |||| | |||||||||||| || || Sbjct 43646 TGCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGA--A 43589 Query 363987 AGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | | | | ||| |||| | ||||| |||| || || || || |||| | Sbjct 43588 AAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTAC 43529 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 ||||| || | | ||||| |||||||||||||| |||||| |||| ||| ||||| Sbjct 43528 GGTGAGGAGTTCGAGGCTCTGTACGAAAAGTATGAGAAGGAGGGCAAGGGTCGCAAGACT 43469 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || |||||||| |||| |||||| | || | |||| |||||| |||| |||| Sbjct 43468 ATCAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAA-ACCC 43410 Query 364165 TAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 | | ||| | ||||| ||| | |||||||||||| |||||| || |||| || || | Sbjct 43409 TTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGCACCA- 43351 Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 || | || | ||||| || || || ||||| || || || || |||||| || | Sbjct 43350 TCCGAAGCTCTAACCTGTGCACTGAAATTATCGAGTATTGTGCCCCTGACGAGGTCGCTG 43291 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATG-GTACT--TTTG 364336 | || |||||||| || | || || || | || | | | |||| | || | | Sbjct 43290 TCTGCAACCTTGCCTCTCTGGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGCTACG 43231 Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 || | || | | | || || | | || || | |||| || ||||| | |||| Sbjct 43230 ACTTCAAGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATCATCG 43171 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCC 364451 || ||| | || || | || || || || ||| || ||||| || || || Sbjct 43170 ACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGC-----AACATGCGCCACCGACC 43116 Query 364452 GATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTC--AAGATGGCATTT 364509 |||||||| ||||| |||||||| ||||| | ||| | ||||| ||| | || Sbjct 43115 CATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCCTTC 43058 Query 364510 GATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569 || || || || ||||||| || || ||| ||||||| || || || || || || Sbjct 43057 GAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGCC 42998 Query 364570 ATGACTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTC 364628 | |||| || |||| | |||| || |||| ||||| || | |||| || Sbjct 42997 CTCACTGCCTCCGTG-CAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTC 42939 Query 364629 CCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATG 364688 || || |||| | ||||||| || | ||||| |||| ||| |||| || || Sbjct 42938 TCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTCTG 42879 Query 364689 GAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGT 364745 | ||||||| || || || | || |||| || |||| || ||| || ||| | Sbjct 42878 GGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGTATCCGTAACAGTCTGCTCCT 42819 Query 364746 TACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGA 364805 | || || ||||| || || ||| | ||||| || || ||||||||||||||||| Sbjct 42818 T---GCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTCGA 42762 Query 364806 ACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAA 364865 || | || ||| | || || || || || | || || || | ||| || || Sbjct 42761 GCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAA 42702 Query 364866 TAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTA 364925 | || ||||||| ||| |||| || |||||| || ||||||||| Sbjct 42701 CCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACCG 42642 Query 364926 TATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCC 364985 ||||| || | |||||||| | ||||||||||| | || | ||| | ||| | Sbjct 42641 CATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGGC 42582 Query 364986 TATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCG 365045 | | || || || || ||||| ||||| ||| || || | ||||| || || || Sbjct 42581 TCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTGACCG 42522 Query 365046 CGGTGCTTTTATCTGTCAGAGCCAGTC 365072 ||||| || || |||| |||||| Sbjct 42521 AGGTGCCTTCATTGATCAGTCCCAGTC 42495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303292046682452