Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2145 95.1 1e-14 >seq2145 Length=460897 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| || ||||| || Sbjct 353578 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 353637 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 353638 GACACTATCGACAACGTCAAGTCCAAGATTCA-GGACAAGGAGGGCATTCCCCCCGACCA 353696 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || ||||| ||||| || | || || | ||||| | |||||||| Sbjct 353697 GCAACGCTTGATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTCTCTGATTACAA 353756 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||| || || || || || || Sbjct 353757 CATTCAGAAGGAGTCTACTCTTCA 353780 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 25005 ATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACT 25064 ||| | || ||||| | || || || | ||||| |||| || ||||| || |||||| Sbjct 353866 ATAGTCGTCAAGACCCTCACTGGCAAGACTATCACTCTCGAGGTTGAGTCATCCGACACT 353925 Query 25065 ATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGC 25122 ||||| || || ||| ||| ||| ||||| || || || || ||||| || |||| Sbjct 353926 ATCGA--CAATGTCAAGTCAAAGATCCAGGACAAGGAGGGCATCCCTCCTGATCAGCAGC 353983 Query 25123 GGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTC 25182 | | || ||||| ||||| ||| | || || | || || | | ||| ||||| |||| Sbjct 353984 GCCTGATCTTTGCTGGCAAGCAACTTGAGGACGGCCGAACCCTCGCCGACTACAACATTC 354043 Query 25183 AAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| || || ||| | || || Sbjct 354044 AGAAGGAATCTACCCTTCATCTCGTCCT 354071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433308533552090