Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2855 156 5e-33 >seq2855 Length=139020 Score = 156 bits (172), Expect = 5e-33 Identities = 372/559 (67%), Gaps = 5/559 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||| || || || || || | ||| ||| ||| || | Sbjct 125814 GCAGGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAG 125873 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||||||||| || || || ||||| ||| || || Sbjct 125874 GCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAA 125933 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || || | ||| | |||||| | | ||| | || Sbjct 125934 GATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTA-TCCT 125992 Query 93271 G-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 | |||||| | ||||| ||||| || || || ||||| | || || || |||| Sbjct 125993 GGATCCATCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATGGCGT 126052 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || ||||| ||||| | | | || ||||| || || || | || || || Sbjct 126053 TGAAGAGGTAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAGGGAGTAGG 126112 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | ||||| |||| |||||||| || ||||| ||||||||||| | ||| || | || Sbjct 126113 TCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCCTCGGGGA 126172 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| || || | |||| ||| ||||| || || ||||| |||||||| || || | Sbjct 126173 TCTGGACCTCGCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCAGAGGCAG 126232 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCC 93566 | || || || | || || | || | |||||| | | | | || | || Sbjct 126233 CGAAGAAGGCAAGGATGTGAGAGACGAAGAACTGCTCATCGGCAGTCAGGCGGTTGTTCC 126292 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 | ||| ||||| || || ||||| | || ||| ||||||| || || || || || | Sbjct 126293 AGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCAGCCT 126352 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 126353 TCTTGTACATTTGCCAGAT 126371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556835142638640