Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3012 246 3e-60 >seq3012 Length=424931 Score = 246 bits (272), Expect = 3e-60 Identities = 1064/1668 (64%), Gaps = 36/1668 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| ||| ||||| || |||||||||||||| || || | | Sbjct 44191 TACCAATACTTTGGCTTCAAGACTTTGGAGCGATCCTACCTCCTCAAGATTGACGGTAAG 44132 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||||| || || || || | ||||| || | | || || || | || Sbjct 44131 ATTGTCGAGCGCCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGAT 44072 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGCCAC 93896 || | || ||| | | | | ||| ||| | ||| |||| || | Sbjct 44071 ATCGAGCGAGTCTTGGAGACATATAACCTGATGTCCAGCAAATTCTTTACACATG-CCTC 44013 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 || || || |||||||| || ||||| ||| || |||| || || ||| || | Sbjct 44012 TCCCACACTCTTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGA 43953 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| |||| || || || | ||| | |||||| |||||| | ||||| Sbjct 43952 TATGAAGGACGACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTC 43893 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCTAC 94074 || || || || || || | | || ||| |||| ||||| | || |||||| Sbjct 43892 CAAGATGGCTGGAGGTATTGGTCTGAACGTGCAC--CGTATCCGTGCTACTGGCTCCTAC 43835 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||||||||| || || ||||||||| | || |||||||| || |||||||||||| Sbjct 43834 ATCGCCGGTACCAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAAC 43775 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || ||||| || || |||||||| | | | ||| |||| || |||| ||| Sbjct 43774 ACTGCTCGCTATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTC 43715 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||| | || || | ||| | || || |||||||||||||| || || Sbjct 43714 GAGCCTTGGCACTCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAAGAG 43655 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||||| ||| ||| || ||| | || || ||||||||||| || Sbjct 43654 GAGGTCCGTGCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGT 43595 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 || || || ||| | ||||| || | || ||||| || || || || || ||||| Sbjct 43594 GTTGAAAAGAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGAC 43535 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | || | || || | |||| | || || | ||||||||| | Sbjct 43534 TGCTACGGTGAGGAGTTCGAGGCTCTGTACGAAAAGTATGAGAAGGAGGGCAAGGGTCGC 43475 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| ||| | ||| |||||| ||| || || | || | ||| ||||| || Sbjct 43474 AAGACTATCAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGA 43415 Query 94495 ACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGG 94554 | || | ||| | | |||||| | |||| |||| |||||| || ||||||| Sbjct 43414 AACCCTTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGC 43355 Query 94555 GTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATT 94614 ||| ||||| || |||||||| || ||| |||||||| | | || |||||| | Sbjct 43354 ACCATCCGAAGCTCTAACCTGTGCACTGAAATTATCGAGTATTGTGCCCCTGACGAGGTC 43295 Query 94615 GCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGTC 94673 ||||| || ||||| | ||| | ||| | | ||| | | | |||| | | Sbjct 43294 GCTGTCTGCAACCTTGCCTCTCTGGCTCTGCCTTCCTTCAT-CAA-----CTACGATGAG 43241 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCG-CGGGAAGGATGGTCTT--GAA 94730 |||| | ||| | || || || || | | | ||| || | || || Sbjct 43240 GCCTGC----TACGACTTCAAGAAG---TTGCACGAGGTCAGTCAGGTTGTTATTCGCAA 43188 Query 94731 CCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCT 94790 |||||||| | | |||||| |||| |||||| ||||||||||| ||| ||| | Sbjct 43187 CCTGAACAAGATCATCGACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGCAACAT 43128 Query 94791 GAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCG 94850 | || || ||||| || |||| || ||||| | || || || | | |||| Sbjct 43127 GCGCCACCGACCCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTGCG 43068 Query 94851 TCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTA 94910 |||||| ||| || ||| || | | || | | || ||||| | ||| || Sbjct 43067 CATGCCCTTCGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTA 43008 Query 94911 TTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATC 94970 ||| ||| | | ||||| || |||||| ||| | || || || | Sbjct 43007 CCACGCTGCCCTCACTGCCTCCGTGCAGCTGGCCA---AGGAGGAGGGTCCCTACTCCAC 42951 Query 94971 GTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCC 95030 ||| || || ||| |||| || | ||||||||| | ||| || ||||| Sbjct 42950 CTTCAAGGGCTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCC 42891 Query 95031 CTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 ||| | || | |||||||| |||| || | || || | | ||||||| | || Sbjct 42890 CTCTGACCTCTGGGACTGGGAGACTCTTCGAGAGGAAGTCAAGACACACGGTATCCGTAA 42831 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| | || || ||||| || ||| || | ||||| || ||||||||||| Sbjct 42830 CAGTCTGCTCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGA 42771 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| |||| |||||||||| | ||| | | || || ||||| || || |||| Sbjct 42770 GTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCA 42711 Query 95211 CGTCATCAACAAGCACCTCCTACGGGACC-TGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| || || ||||| || || | ||||| ||||| || Sbjct 42710 GGTTGTCAACCCCTGGCTGCTCAAGGACCTTGTCGAC-ATGGGTCTGTGGTCCGATGCTA 42652 Query 95270 TCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCG 95325 | ||||||| | |||| | || || ||| | |||||||| || | || || Sbjct 42651 TGAAGAACCGCATCATTGCT----GAGAATGGTTCCATTCAGAACATTCCCAACATCCCT 42596 Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || ||||||| || || ||||| || |||||||| | |||||| Sbjct 42595 GCCGATGTCAAGGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGC 42548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700405628560