Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3012 116 6e-21 >seq3012 Length=424931 Score = 116 bits (128), Expect = 6e-21 Identities = 444/679 (65%), Gaps = 16/679 (2%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTT-CTCAGATAGTACATGCCGG 203900 || || ||||||||||| | | || | |||| |||| | | || ||||||||||||| Sbjct 42357 TCAACAGTGAACTGAATAG-GAGCAGCAGCAG-CCTGTGTGCGAAGGTAGTACATGCCGG 42414 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| || || || ||| || | |||||| | | |||| || |||||| Sbjct 42415 TCTTGAGACCAAGCTTCCAGCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGT 42474 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCC 204019 | |||||| |||||||| |||||| || || ||||| ||| || || || |||||| Sbjct 42475 CCTTCATGTGGATGTTCAGTGACTGGGACTGATCAATGAA-GGCACCTCGGTCAGCGGCC 42533 Query 204020 ATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 || | | | ||| ||| ||||||||||| || ||||| ||| | || | Sbjct 42534 ATCTGAACGACCTGGCG--CTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACAT 42591 Query 204078 GTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 ||| | | | | || |||| | || || || || || || | | || || Sbjct 42592 CGGCAGGGATGT-TGGGAATGTTCTGAATGGAACCATTCTCAGCAATGATGCGGTTCTTC 42650 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 | | || ||||| |||| || || ||| | ||| |||||||| | | Sbjct 42651 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 42710 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || || || | || || | ||| | | | |||| |||| | || ||||| | Sbjct 42711 TGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 42770 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 ||||||||||| | |||||||| ||| ||||| || ||||| ||||| |||||||| | Sbjct 42771 TCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 42830 Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCT-TCAGAGAGGTCCAGTCGTGCATCGCACT 204375 || || | ||||| | | | || | | | || |||| |||||| | || Sbjct 42831 TTACGGATACCGTGTGTCTTGA-CTTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCAGA 42889 Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435 ||| || ||| ||||||||||||||| | ||| || | | | | || ||||||| | Sbjct 42890 GGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCTTGAA 42949 Query 204436 CGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC-GAGGCGGCCATGGCGTGATAGT 204494 || | || || ||||| | |||||| ||||| ||||| | | ||| | || Sbjct 42950 GGTGGAGTAGGGACCCTCCTCCTTGGCCAGC-TGCACGGAGGCAGTGAGGGCAGCGTGGT 43008 Query 204495 ACATGGTCTCAAAGATCTG 204513 | |||||||| |||||||| Sbjct 43009 AGATGGTCTCGAAGATCTG 43027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795118563224160