Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3012 219 5e-52 seq2855 143 3e-29 seq3040 87.8 2e-12 >seq3012 Length=424931 Score = 219 bits (242), Expect = 5e-52 Identities = 1141/1784 (64%), Gaps = 59/1784 (3%) Strand=Plus/Plus Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610 |||| | |||||||||| || || |||| | || || |||||||| |||||| Sbjct 42357 TCAACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTC 42416 Query 105611 TTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGAGAGCTTGGACATCGTTGGACT 105669 ||||| || | ||||| || | || | |||||| | || |||| |||||| || Sbjct 42417 TTGAGACCAAGCTTCCA-GCCTGCAAAGTGCATACTGGTGATCTTGCCCATCGTGGGGTC 42475 Query 105670 TTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCC 105727 | |||| | |||| ||| |||| | ||||||||| ||| || | || ||| Sbjct 42476 CTTCATGTGGATGTTCAGTGACTGGGACT--GATCAATGAAGGCACCTCGGTCAGCGGCC 42533 Query 105728 ATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 || | || ||| | | || ||||| || || || ||| ||||| ||| Sbjct 42534 ATCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAGAGCCTTGACATCG 42593 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTC 105844 | ||||| | | || || ||||| ||||| | | || ||| || | | |||| Sbjct 42594 GCAGGGATGTTGGGAATGTTCTGAATGGAACCATTCTCAGCAATGA---TGCGGTTCTTC 42650 Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904 ||| | | |||||| ||||| || | || || |||| || |||||||| | Sbjct 42651 ATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGCAGCCAGGGGTTGACAACC 42710 Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 ||||| || |||||| | || | | |||||||| | |||||||| || ||||| Sbjct 42711 TGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCAC 42770 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 || || || |||| || || | ||| ||| || ||||| || || | | |||||| Sbjct 42771 TCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAGGAGCAGACTG 42830 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA---TCCCAGTCGTAGTTG--A 106079 ||||| | ||| | | ||||| ||||| ||| | |||||||| || | | Sbjct 42831 TTACGGATACCGTGTGTCTTGAC---TTCCTCTCGAAGAGTCTCCCAGTCCCAGAGGTCA 42887 Query 106080 GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCT 106139 | || || || |||| |||| || || || || | || | || | |||||| |||| Sbjct 42888 GAG-GGCTTGACGTTCC-ACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAGCCCT 42945 Query 106140 CAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATT-CACAGCTCGCCTCCAGGGATGCG 106198 || || |||| ||| | | | |||| | ||| | || |||| ||| Sbjct 42946 TGAAGGTGGAGTAGGGACCCTCCTCCTTGGCCAGCTGCACGGAG-GCAGTGAGGGCAGCG 43004 Query 106199 TGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCG 106258 || || ||||| || ||||| | || | ||| || || ||| || || | Sbjct 43005 TGGTAGATGGTCTCGAAGATCTGCTTGTTGAGCTCACGAGCCTCGGGTGACTCGAAGGGC 43064 Query 106259 TAGCGGCACAA-AATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317 ||| || | || || |||| || || || |||||||| | |||||| |||| ||| Sbjct 43065 ATGCG-CAGAGCAAGGAAAGCATCAGCAAGGCCCTGAACACCGAGACCAATGGGTCGGTG 43123 Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCG 106374 ||||| || || | ||| || ||| || || || || ||| |||| Sbjct 43124 GCGCATGTTG--CTGTTGCG-AGCCTCCGGGACAGGGTAGTGGTTCACGTCGATGATCTT 43180 Query 106375 GTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-AAGTTTTTCATAATCAAAAGTGC 106433 ||| || || |||||| || ||| || || || || || | | || | || Sbjct 43181 GTTCAGGTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCTTGA-AGTCGTA---GC 43236 Query 106434 GAGTCTCTTCAT---TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCG 106490 | ||| || | ||| | || || || | || || | ||||| ||||| Sbjct 43237 AGGCCTCATCGTAGTTGATGAAGGAAGGCAGAGCCAGAGAGGCAAGGTTGCAGACAGCGA 43296 Query 106491 TCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCC 106550 ||| || | ||||| | |||||| || |||| ||| || || || || | Sbjct 43297 CCTCGTCAGGGGCACAATACTCGATAATTTCAGTGCACAGGTTAGAGCTTCGGATGGTGC 43356 Query 106551 CCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCC 106610 | | ||||||||||| ||||| |||||| |||||||||||||||||| | || | | Sbjct 43357 CGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAAGGGTTTC 43416 Query 106611 CCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC-TGGTACAATGGC 106668 | ||||| ||||| | || ||||| || | ||| | | || | | | || || | || Sbjct 43417 CAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAGCTTCTGAGCCTTGATAGTCTTGC 43476 Query 106669 GTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG 106727 | ||| | |||||| ||| |||||| ||| || || || ||||||||||| Sbjct 43477 ---GACCCTTGCCCTCCTTCTCATACTTTTCGTACAGAGCCTCGAACTCCTCACCGTAGC 43533 Query 106728 CGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAA 106787 ||||| ||| || || || || || || | || | ||| | ||| || |||| Sbjct 43534 AGTCGGCGAGGCCAGGGCACTCGTTGGGGCACATCAGTGTCCAGTCACCGTTCTTTTCAA 43593 Query 106788 CCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCC 106846 | |||||||| ||||| || || ||||| |||| || || || | ||| || || Sbjct 43594 CACGCTTCATAAAAAGATCAGGGATCCAAAGGGCGAGGAACAGGTCACGGGCACGGA-CC 43652 Query 106847 TCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGC 106906 || || | ||| ||||| ||| | ||||||||||| | || ||| | |||||| ||| Sbjct 43653 TCCTCTTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCAGAGTGCCAAGGC 43712 Query 106907 TCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCT 106963 || || |||| || | || || ||| ||| | |||| |||||||| || Sbjct 43713 TCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGTTGCCACCCTGATCGACATAGCGAGCA 43772 Query 106964 GTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCG 107022 ||| ||| || || |||||||| |||| || || | ||| ||| || || || || Sbjct 43773 GTGTTGTTGAAGACACGAAGCATAGGAACAACGCCGTTGGATGTACCGTTGGTACCGGCG 43832 Query 107023 A-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACT 107081 | || ||| | | || | | | || | || || |||||||| |||||| || Sbjct 43833 ATGTAGGAG--CCAGTAGCACGGATACGGTGCACGTTCAGACCAATACCTCCAGCCATCT 43890 Query 107082 TTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGT 107141 | ||||| ||||| | | ||||| | ||||| || | || ||| ||||| Sbjct 43891 TGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCA 43950 Query 107142 TGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTG 107201 | | | | ||||||| |||| || || || |||||||| |||||||| || | Sbjct 43951 TATCAACCAAGAAGCAAGATGACAATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGG 44010 Query 107202 GTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATC 107259 | | || || || | | | ||| ||||||| || |||||||||||||| || Sbjct 44011 GAGAGGCATG--TGTAAAGAATTTGCTGGACATCAGGTTATATGTCTCCAAGACTCGCTC 44068 Query 107260 AATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || || || || ||| || | | ||||||||| | ||||| Sbjct 44069 GATATCATCACCCCAGATACCAACAGACACACGCATGATCATGT 44112 >seq2855 Length=139020 Score = 143 bits (158), Expect = 3e-29 Identities = 338/504 (67%), Gaps = 20/504 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| |||||||||||||| ||| ||||| ||||| ||||| Sbjct 125530 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATG 125589 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCC-CAACTTGTTTGAGG 117099 ||||| || || || | || || | | | | || || |||| ||| Sbjct 125590 AAGTCGAAGGGGTTGGTAGCCTTGTAGACCTTCTCGTTGCCAAGAGCAACA------AGG 125643 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 |||||||| | || ||||||| |||| ||| ||||||||||| |||| || Sbjct 125644 AGACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAGTTCATGCCGAGAAGG 125703 Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219 ||| ||||| || || || |||| | | |||||| || || || | | |||| Sbjct 125704 GCACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGATGATG 125763 Query 117220 GCGTGGATAGTTTCGGTAGTGGGTCTA---TTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276 | ||||| | | | ||| | | || | || | || ||| || |||| Sbjct 125764 TCCTGGATCATCTGCTTGCTGGCACGACCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 125820 Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336 || || ||||||||||||||| || || || || || || |||||| ||||| ||| Sbjct 125821 AAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGC 125880 Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396 |||||||| |||||||| | ||| | |||| | || | ||| ||||||||||||| Sbjct 125881 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTGAAGAAGATACCC 125940 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCA 117455 || ||| || || |||| || |||| ||| |||||| ||| | || | | | ||| Sbjct 125941 TCAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAG-GAGTCCTTATCCTGGATCCA 125999 Query 117456 TTTCATTGCCCATTTCGCCTTCTT 117479 | || ||||| | |||||||| Sbjct 126000 TCGGATGGCCCAGTCGGCCTTCTT 126023 >seq3040 Length=190208 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 155045 ATGGTCGTGTTGCACCACGATCCGGTCTCGCTGTGAAGCATGGTATTCAAGTTGGTGCGG 155104 |||| || |||| || ||||||||||||||| |||||| ||| | || || | Sbjct 120269 ATGGACGCATTGCCCCTCGATCCGGTCTCGCTTCCAAGCATTTCATTGACACAGGCGCTG 120210 Query 155105 GTGTTATTGATCCCGACTATACAGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGAGACA 155164 |||| || ||| |||| || ||| | ||||| ||| | || ||||| || || Sbjct 120209 GTGTCATCGATGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTTTTCAACCATAACGAAT 120150 Query 155165 AAGACTTTGAGGTAAAGAAAGGGGATCGCATCGCACAACTTGTCCTTGAGCGC 155217 ||||||||||| ||| | || || ||||| || |||||||| || |||||| Sbjct 120149 CCGACTTTGAGGTGAAGGAGGGCGACCGCATTGCTCAACTTGTTCTGGAGCGC 120097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589953616634640