Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3012 361 1e-94 seq2855 181 2e-40 >seq3012 Length=424931 Score = 361 bits (400), Expect = 1e-94 Identities = 1237/1894 (65%), Gaps = 112/1894 (6%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| ||||| || ||||||||||||||||| Sbjct 42360 ACAGTGAACTGAATAGGAGCAGCAGCAGCCTGTGTGCGAAGGTAGTACATGCCGGTCTTG 42419 Query 212613 AGGCC---CTTGCCCCAGCCGTGCAT-GTGCATTGCTGTGAGTTTCTTCAGCTTAATATT 212668 || || ||| |||||| |||| |||||| |||| |||| | || | Sbjct 42420 AGACCAAGCTT---CCAGCC-TGCAAAGTGCATACTGGTGA---TCTTGCCC---ATCGT 42469 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | |||||| ||||| ||| || ||||| | | Sbjct 42470 GGGGTCCTTCATGTGG---------ATGTTCAGTGACTGGGACTGATCAATGAAGGCACC 42520 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||||||||| | | || | | ||| || | |||||| || ||||| | | Sbjct 42521 TCGGTCAGCGGCCATCTGAACGACCTGGCGCTGAGAAATCTCCCAAACAGTCTTATACAG 42580 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848 | |||| || | |||| | ||| |||||||| | || || || |||| Sbjct 42581 AGCCTTGACATCGGCAGGGATGTTGGGAATGTTCTGAATGGAACC-------ATTCTCAG 42633 Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900 | || | ||| ||| | ||| ||| || ||| || | ||| ||||| | Sbjct 42634 CAATG-ATGCGGTTCTTCATAGCATCGGACCACAGACCCATGTCGACAAGGTCCTTGAGC 42692 Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || |||||||| | |||||| ||||| | ||| || | | |||||| | ||| || Sbjct 42693 AGCCAGGGGTTGACAACCTGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAG 42752 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||||||||||| || ||||||||| ||||||||||| | || ||||| || ||||| Sbjct 42753 GTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATA 42812 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC---CGAAGC-TC 213076 ||||| | || |||||||| | | ||||| | | ||| | ||||| || Sbjct 42813 GGAGCAAGGAGCAGACTGTTACGGATACCGTGT--GTCT-TGACTTCCTCTCGAAGAGTC 42869 Query 213077 TGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAA 213136 | |||||||||| | |||| | ||| |||||||||||||| ||||| | Sbjct 42870 T-CCCAGTCCCAGAGGTCAGAGGG---------CTTGACGTTCCACATGTCGAACTGGAG 42919 Query 213137 GATGCCTTTGCTCA----CGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGG 213192 ||| || |||| |||| ||||| | | | ||||||||| || | |||||||| Sbjct 42920 GATACC----CTCAGAGGCGGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGG 42975 Query 213193 CCAGCTCGCA-GGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||||| ||| ||| || |||||||||| ||||||||| || || |||| | ||||| Sbjct 42976 CCAGCT-GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTG 43034 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 |||| ||||| || ||| ||||||||| || |||| ||||||| || Sbjct 43035 AGCTCACGAGCCTCGGGTGACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGG 43094 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 ||||| || |||| || ||||||| ||| | || ||| ||| |||| |||| | Sbjct 43095 CCCTGAACACCGAGACCAATGGGTCGGTGGCGCATGTTGCTGTTGCGAGC-CTCCGGGAC 43153 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 ||||| ||| ||||||||||||||| |||||||| | | || | |||| | Sbjct 43154 AGGGTAGTGGTTCACGTCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTC 43213 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGC------CCCCGTCCTGCACAAACTCAGGCAG 213484 | || || | ||||| |||||| | ||| | | || |||||| Sbjct 43214 GTGCA---AC---TTCTTGAAGTCGTAGCAGGCCTCATCGTAGTTGATGAAGGAAGGCAG 43267 Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTC 213544 || | ||| |||||||| || || ||||| | || | | ||||| || || || Sbjct 43268 AGCCAGAGAGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCGATAATTTC 43327 Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604 ||||||||||| || |||||||||||| ||||||| ||| ||| ||||| | || Sbjct 43328 AGTGCACAGGTTAGAGCTTCGGATGGTGCCGAGGTTCTTTTGG-TTGCTCTTGCGGTTGC 43386 Query 213605 A-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC 213663 | | |||||||||||||||| | ||| || ||||| ||| | | | || | |||| Sbjct 43387 AGGCATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAA--TGGC 43444 Query 213664 --TCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTG 213721 ||| || | | ||||||| | | ||| | | | | ||| |||| Sbjct 43445 ATACCAAAGCTTCTGAGCCTTGA-TAGTCTTGCGACCCTTGCCCTCCT--TCTCATACTT 43501 Query 213722 TTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGG 213781 |||||| || | | ||| || | || || | | || || || || ||| Sbjct 43502 TTCGTACAGAGCCTCGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGG 43561 Query 213782 ACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCA 213841 ||||| || ||||||| |||| | | || | || ||| || || || |||| ||| Sbjct 43562 GCACATCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCA 43621 Query 213842 CAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATC 213901 || ||| ||||||||| | || | ||| || || ||| || || ||||| Sbjct 43622 AAGGGCGAGGAACAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTTCGGAGATC 43681 Query 213902 TAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---G 213958 || || || |||| || | |||||| ||||| | |||||||||||| || || | | Sbjct 43682 AAGGAACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCG 43741 Query 213959 CCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCA----TGTTGAAGATGCGCAGGACGG 214014 | | ||||| ||||| || | | | || | || ||||||||| || || | | Sbjct 43742 CTTGTTGCCACCCTGATCGA----CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAG 43797 Query 214015 GTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCA 214071 | || | |||||||| ||| |||||||| || || || || ||||| | || | | Sbjct 43798 GAACAACGCCGTTGGA-TGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCACGGATA 43856 Query 214072 GGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCA 214131 | ||| | | ||| || || || || || ||||||||||||||| ||| | | | Sbjct 43857 CGGTGCACGTTCAGA--CCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGA 43914 Query 214132 CAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGA 214191 ||| || |||||| | || ||||| || | | | | ||||||||| || | Sbjct 43915 GAGTATCGTAGATGCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACA 43974 Query 214192 GCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGT 214251 |||||| | | |||| |||||| || ||||| |||||| | | || ||| Sbjct 43975 ATTGGGGCTGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGC 44034 Query 214252 TAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAG 214311 | || | || | || ||||||| |||| ||| || | ||| | || Sbjct 44035 TGGACATCAGGTTATATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACAG 44094 Query 214312 -CGCACCTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGC--CCTTGAGCA 214368 | || | ||| | ||||||||| || | ||| | ||| | | |||||| | Sbjct 44095 ACACA-CGCATGATCATGTGCTGAGGGCGCTCGA--CAATCTTACCGTCAATCTTGAGGA 44151 Query 214369 GGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 ||||||| ||||||| ||||||||| |||||||| Sbjct 44152 GGTAGGATCGCTCCAAAGTCTTGAAGCCAAAGTA 44185 >seq2855 Length=139020 Score = 181 bits (200), Expect = 2e-40 Identities = 491/742 (66%), Gaps = 37/742 (5%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 125526 CTGGTAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 125585 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGT-GTCAGGCCCATCTGTTCC 47953 ||||||| ||||||||||| | || || ||| ||| | || | || | Sbjct 125586 CATGAAGTCGAAGGGGTTGGTAGCCTTGTAGACCTTCTCGTTGCCAAGAGCAACA----- 125640 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || || |||| |||||| |||| || || | ||||||| ||||||||| | Sbjct 125641 AGGAGACGATCGGCGACGAACTCAATATACTGCTTCATGAGGTCAGAGTTCATGCCGAGA 125700 Query 48014 AGGGACAC-GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 |||| ||| ||| | ||||| ||||| ||||||| ||| || ||||| || | Sbjct 125701 AGGG-CACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCAGTGAT 125759 Query 48073 AATCTGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGC-TTG------GCATAG 48124 || | || || | |||| ||| || ||| | | ||| | | | Sbjct 125760 GATGTCCT------GGATCATCTGC----TTGCTG-GCACGACCCTTGAGGTGAGAGTGG 125808 Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 || | |||||||||||| |||| | || || || || ||||||| ||||||||||| Sbjct 125809 AGGAGGCAGGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATGAGCTCGTTGGAGAAG 125868 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 || || ||||||| || | || ||||||||||| || | || || | || | Sbjct 125869 GTCAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCAAAGGCACCGCTG 125928 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 |||||||| ||||| || || ||||| || ||| | || | || || | || ||| Sbjct 125929 AAGAAGATACCCTCAACAGCAGCGAAGGCAACGAGACGCTGGGCAAAGGAGGAGTCCTTA 125988 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 || |||||| | |||||||| |||||||| |||||| || || ||||| ||| Sbjct 125989 TCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTTTCGGATGCAAGGAATGGTCTCAATG 126048 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTT 48421 || |||||| | | | || | | ||| | ||||| | |||| || Sbjct 126049 GCGTTGAAGAGGTAGGTTCGCTGGGCGGGCTCCTTGATGTAGGTGTCAATGAGAAG---G 126105 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 | ||| |||||||||| | ||||| || ||||||||| |||||||| | ||| Sbjct 126106 GAGTAGGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAACAACGAGCC 126165 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541 || | ||| || || ||||| ||| | || ||||| ||||| || ||||| Sbjct 126166 TCGGGGATCTGGACCTCGCCACTGAATCGCTCAACGAGGTTCTCGTTGACAATACCATCA 126225 Query 48542 GAAGCAGCAAAGAAGGCAAGGA 48563 || ||||| ||||||||||||| Sbjct 126226 GAGGCAGCGAAGAAGGCAAGGA 126247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931489879626240