Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3012 284 2e-71 seq2855 210 4e-49 >seq3012 Length=424931 Score = 284 bits (314), Expect = 2e-71 Identities = 850/1281 (66%), Gaps = 53/1281 (4%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || ||||||||||||||||||||||| |||||| ||||||||| ||| | |||||||| Sbjct 42993 GTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTGAG-CTCACGAGCCTCGGG 43051 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 || ||||||||| ||||| | | ||||| | || || || ||||| || |||| | Sbjct 43052 TGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCAGCAAGGCCCTGAACACCGAGA 43109 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 || ||||| | ||| | | ||||| | ||| || || || || || || ||| | Sbjct 43110 CCAATGGGTCGGTGGCGCATGTTGCTGTTGCGA--GCCTCCGGGACAGGGTAGTGGTTCA 43167 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 ||||||| | ||||| ||||| || | | || | | |||||| || ||||| Sbjct 43168 CGTCGATGATCTTGTTCAGGTTGCGAATAACAACCTGACTGACCTCGTGCAACTTCT--- 43224 Query 221652 GATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGC 221711 |||| | | | | | |||| || | | | || || || || | Sbjct 43225 ---TGAAGTCGTAGCAGGCCTCATCGT--AGTTGATGAAGGAAGGC----AGAGCCAGAG 43275 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGA 221771 ||| ||||| || || || |||||||| | ||||| || || || || || | Sbjct 43276 AGGCAAGGTTGCAGACAGCGACCTCGTCAGGGGCACAATACTCGATAATTTCAGTGCACA 43335 Query 221772 GGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831 |||| || |||||| || |||| || || || |||||| ||| || |||| Sbjct 43336 GGTTAGAGCTTCGGATGGTGCCGAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGGCATCCT 43395 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||||||||| || || |||||||| ||||||| | ||||| | ||| || | Sbjct 43396 TGTAGAGCATGAAAGGGTTTCCAGTCTCAGTCTGAGCCTCAAGAATGGCATACCAAAGCT 43455 Query 221892 CTCTG-GCGCTCACCGTCCTCTTGAC---TGCACCCTCGGTCTTTTCATACCCG--GTAT 221945 |||| || | | ||| | ||| ||| |||| ||| |||||| ||| Sbjct 43456 -TCTGAGCCTTGATAGTCTTGC-GACCCTTGC--CCTC---CTTCTCATACTTTTCGTAC 43508 Query 221946 AGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACA 222005 ||||| | | |||| |||||||| ||| | ||||| || ||| | ||| |||| Sbjct 43509 AGAGCCT--CGAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGGCACTCGTTGGGGCACA 43566 Query 222006 TCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCG 222065 |||| |||||| ||| | || || | || ||| || || || |||||||| || | Sbjct 43567 TCAGTGTCCAGTCACCGTTCTTTTCAACACGCTTCATAAAAAGATCAGGGATCCAAAGGG 43626 Query 222066 CCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAA 222125 | | || || || | || || |||||| |||| ||| || | ||||| | | Sbjct 43627 CGAGGAACAGGTCACGGGCACGGACCTCCTCTTTACCGTGGTTCTTTCGGAGATCAAGGA 43686 Query 222126 ACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGT 222185 |||| || | |||| |||||| ||||| || |||| ||| | ||| ||||||||||||| Sbjct 43687 ACTCGAAGACATCAGAGTGCCAAGGCTCGAGGTAGATGGCAAAAGCACCGGGTCGCTTGT 43746 Query 222186 TGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244 ||||||||||||| | ||| ||| | |||||||| ||||| | || || | Sbjct 43747 TGCCACCCTGATCGA-CATAGCGAGCAGTGTTGTTGAAGACACGAAGCATAGGAACAACG 43805 Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GC 222303 ||||||||| ||||||||| || ||||| | || || | || ||| | || Sbjct 43806 CCGTTGGATGTACCGTTGGTACCGGCGATGTAGGAGCCAGTAGCAC---GGATACGGTGC 43862 Query 222304 A--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 | || || ||||| || || || ||||||||||| ||| |||||||||| || Sbjct 43863 ACGTTCAGACCAATACCTCCAGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCG 43922 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||||||| ||| ||| ||||| | | | || || ||||| |||| || | Sbjct 43923 TAGATGCCCTCAATACTGTCGTCCTTCATATCAACCAAGAAGCAAGATGACAATTGGGGC 43982 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | | || || ||||| || || |||||| ||| ||||||||| | || |||||| Sbjct 43983 TGAGGGGTACCAGCGTTGAAGAGTGTGGGAGAGGCATGTGTAAAGAATTTGCTGGACATC 44042 Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATC 222539 || | || ||||| | ||||| |||| | || ||| || | | || | | || | Sbjct 44043 AGGTTATATGTCTCCAAGACTCGCTCGATATCATCACCCCAGATACCAACA-GACACA-C 44100 Query 222540 TCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGA 222597 |||| ||||| ||| || | ||| ||| || | | || ||| ||||| || Sbjct 44101 GCATGATCATGTGCTGAGGGCGCTCGACAATCTTACCGTCAATCT--TGAGGAGGTAGGA 44158 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657 | |||| ||||||||| |||||||| | | | || || | | | | || | ||| Sbjct 44159 TCGCTCCAAAGTCTTGAAGCCAAAGTATTGGTATTGGAAATCGCGGTCATAGACAATGGC 44218 Query 222658 GGCGTCCAGCTCCGACTTGTG 222678 || ||||| |||| |||||| Sbjct 44219 GGAGTCCAACTCCTCCTTGTG 44239 Score = 96.9 bits (106), Expect = 6e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | ||| || | | |||||| | ||| || ||| | || Sbjct 42701 GTTGACAACCTGGAACTCACCAGCGAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGG 42760 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||||||||||| ||||||| || ||||| || ||||| || || | Sbjct 42761 CTCGAAGCACTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTAGGCATAGGAGCAAG 42820 Query 221236 CAGCAGACTGTTGCGCAGTCCGAATCTATTGATGGACTTTCTCAGCGTGTTCCAGTCACA 221295 ||||||||||| || | ||| | | |||| || || || || | |||||| || Sbjct 42821 GAGCAGACTGTTACGGATACCGTGTGTCTTGACTTCCTCTCGAAGAGTCTCCCAGTCCCA 42880 Query 221296 G 221296 | Sbjct 42881 G 42881 >seq2855 Length=139020 Score = 210 bits (232), Expect = 4e-49 Identities = 401/587 (68%), Gaps = 13/587 (2%) Strand=Plus/Minus Query 25463 TAACACACAAAGATATAT--GGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGC 25520 ||||| || | |||| || || | ||||||||||||||| | || |||||| || Sbjct 126387 TAACAGACCATGATAGATCTGGCAAATGTACAAGAAGGCTGAGGCTTCCTTCTGGACTGC 126328 Query 25521 CGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACG 25576 ||| ||||||||||| ||||||| | ||| |||| || || || | || | Sbjct 126327 CGAGGAGATTGATCTCTCCAAGGATCTCCACGACTGGAACAACCGC-CTGACTGCCGATG 126269 Query 25577 AGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACG 25636 ||||| || || || | | || ||||| || |||||||||||||| || |||| Sbjct 126268 AGCAGTTCTTCGTCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGTATTGTCAACG 126209 Query 25637 AGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACG 25696 |||| || ||| |||||| | || || ||| | ||||| |||||||||| Sbjct 126208 AGAACCTCGTTGAGCGATTCAGTGGCGAGGTCCAGATCCCCGAGGCTCGTTGTTTCTACG 126149 Query 25697 GTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---A 25753 | |||||||| || || || | ||||||||| || || ||||| || | Sbjct 126148 GCTTCCAGATCATGATGGAGAACATCCACTCTGAGACCTACTCC---CTTCTCATTGACA 126092 Query 25754 CGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCA 25813 | ||||| | || |||| || || || || ||||| ||| ||| || Sbjct 126091 CCTACATCAAGGAGCCCGCCCAGCGAACCTACCTCTTCAACGCCATTGAGACCATTCCTT 126032 Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTG 25873 ||||| | |||||| |||||||| |||||| | || | | | |||| Sbjct 126031 GCATCCGAAAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTCCTCCTTTG 125972 Query 25874 GCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGG 25933 | |||| || || ||||| |||||||| ||||| ||||| ||||||||| | ||||| Sbjct 125971 CCCAGCGTCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCT 125912 Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993 | ||||||||||||||| || || ||||||||| ||| ||| ||||||||||||| Sbjct 125911 CTATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCA 125852 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 || | || ||||||||||||| || ||||||||||| ||| || Sbjct 125851 TCTCTCGTGATGAGGGTCTCCACACTGACTTTGCCTGCCTCCTCCAC 125805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928802003475840