Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3012 235 7e-57 seq2855 143 3e-29 seq3040 87.8 2e-12 >seq3012 Length=424931 Score = 235 bits (260), Expect = 7e-57 Identities = 1146/1784 (64%), Gaps = 57/1784 (3%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||| ||||||| || | | || ||| || || || || || || Sbjct 44120 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 44061 Query 75271 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 75328 |||||||||||| || ||||||| ||| | | | || || || | || || ||| Sbjct 44060 CTTGGAGACATATAACCTGATGTCCAGCAAATTCTTTACA--CATGCCTCTCCCACACTC 44003 Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||| |||||||| || || || |||| ||||||| | | | | ||||| Sbjct 44002 TTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 43943 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 43942 GACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 43883 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 75506 || |||||||| || || | || | | | || | | ||| || ||| || | Sbjct 43882 GGAGGTATTGGTCTGAACGTGCACCGTATCCGTGCTACTGG--CTCCTACATCGCCGGTA 43825 Query 75507 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 75566 | || ||| ||| | || || |||| |||||||| || || ||| ||| || |||| Sbjct 43824 CCAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCT 43765 Query 75567 ATGTAAATCAAGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGG 75622 |||| |||| | | ||| | || | ||| | | || ||||| | || || ||| Sbjct 43764 ATGTCGATCAGG-GTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGG 43706 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || | ||| || | ||||||||||| | ||| ||||| ||| | || |||| || | Sbjct 43705 CACTCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAAGAGGAGG-TCCG 43647 Query 75683 TGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 || | || || || |||| ||||| || || ||||| |||||||| ||||| | Sbjct 43646 TGCCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAA 43587 Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801 | ||| | ||| | || | || || || || || || ||| ||||| || Sbjct 43586 GAACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGG 43527 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGAC 75858 ||||||||| || || || ||| ||||||||| ||||||| | | ||| ||| Sbjct 43526 TGAGGAGTTCGAGGCTCTGTACGAAAAGTATGAGAAGGAGGGCAAGGGTCGCAA---GAC 43470 Query 75859 TGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACAC 75917 | | | || | | || | ||||| | || ||||| | | ||||| |||||||||| | Sbjct 43469 TAT-CAAGGCTCAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAAACC 43411 Query 75918 CATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAA 75977 | | ||||| ||||||||||| || ||| ||||| ||||||||||| | || || | Sbjct 43410 CTTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGCACCA 43351 Query 75978 TCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTG 76037 || ||||| || || ||||| |||||| | ||||| | || ||| |||| Sbjct 43350 TCCGAAGCTCTAACCTGTGCACTGAAATTATCGAGTATTGTGCCCCTGACGAGGTCGCTG 43291 Query 76038 TTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACTT 76094 | ||||| | || || | || || || | ||| | || ||| | || | Sbjct 43290 TCTGCAACCTTGCCTCTCTGGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGC---T 43234 Query 76095 TTGATTATGAAAAACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 || | | || || || || || ||| || |||||| || || ||| || Sbjct 43233 ACGACT-TCAAGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAGATC 43175 Query 76154 ATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 || ||| || || || || ||| || ||| | || || ||||| ||| || Sbjct 43174 ATCGACGTGAACCACTACCCTGTCCCGGAGGCT-CGCAACAG--CAACATGCGCCACCGA 43118 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATT 76269 || |||||| | |||||||| || || || |||| || || | || ||| | || Sbjct 43117 CCCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTT 43059 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 || ||| || || ||| | || | ||||| || ||||| || ||||| | Sbjct 43058 CGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGC 42999 Query 76330 CCTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 ||| || ||| | |||| | | | ||| |||| || || |||| | Sbjct 42998 CCTCACTGC-CTCCGTGCAGCTGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCT 42940 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAA 76446 ||||||| || | || | || ||||| || |||| |||| || || || || | Sbjct 42939 CTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGTCAAGCC-CTCTGACCT 42882 Query 76447 CTACGACTGGGA---TGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 76503 || |||||||| | ||| ||||| ||||| | ||| | ||||||||||| Sbjct 42881 CTGGGACTGGGAGACTCTTCGAGAGGAA---GTCAAGACACACGGTATCCGTAACAGTCT 42825 Query 76504 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 76563 | | || || ||||| || ||| ||| | || || |||| || || || ||||| Sbjct 42824 GCTCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTT 42765 Query 76564 TGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGT 76623 || || ||||| | |||||||||| | || | |||||| |||||||| |||| Sbjct 42764 CGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGT 42705 Query 76624 CAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA 76683 |||| || |||| ||||| | || ||||| |||||| | | ||||||| | Sbjct 42704 CAACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAA 42645 Query 76684 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAA 76743 | ||| | | | |||||||||||| || || | | ||||| | ||| |||| Sbjct 42644 CCGCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAA 42585 Query 76744 GAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGA 76803 | ||| || || || ||||| || | | ||| || | |||||||| || Sbjct 42584 GGCTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTGA 42525 Query 76804 TCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACG 76861 || ||| ||||||||||| |||| ||| |||| | |||| | || ||| Sbjct 42524 CCGAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACG 42467 Query 76862 ATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAAT 76920 ||| |||| || | |||||| | || | || ||||| | || ||||| ||||| || Sbjct 42466 ATGGGCAAGATCACCAGTATGCACTTTGCAGGC-TGGAAGCTTGGTCTCAAGACCGGCAT 42408 Query 76921 GTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 |||||| || || || |||| || || |||||||||| Sbjct 42407 GTACTACCTTCGCACACAGGCTGCTGCTGCTCCTATTCAGTTCA 42364 >seq2855 Length=139020 Score = 143 bits (158), Expect = 3e-29 Identities = 338/504 (67%), Gaps = 20/504 (4%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | | || | ||| |||||| ||| |||| Sbjct 126023 AAGAAGGCCGACTGGGCCATCCGATGGATCCAGGATAAGGACTC-CTCCTTTGCCCAGCG 125965 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 || |||| || || ||| ||||||||||||||| ||| | || | |||| | Sbjct 125964 TCTCGTTGCCTTCGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTT 125905 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||| ||||||||||| ||||| |||||| || || || || || || Sbjct 125904 CTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCTCG 125845 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAA---TAG 65258 ||||||||||||||| || |||||| || ||| || | || | || | | Sbjct 125844 TGATGAGGGTCTCCACACTGACTTTGCC-TG--CCTCCTCCACTCTCACCTCAAGGGTCG 125788 Query 65259 ACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTT 65318 ||| | | | ||||| | |||| | | || || || |||||| | | ||| Sbjct 125787 TGCCAGCAAGCAGATGATCCAGGACATCATCACTGATGCCGTCACCATTGAGCAGGAGTT 125728 Query 65319 CATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTA 65378 | || || || ||||| ||| || |||| ||||||||||| ||| |||| Sbjct 125727 CCTCACTGAGGCTCTCCCCTGTGCCCTTCTCGGCATGAACTCTGACCTCATGAAGCAGTA 125668 Query 65379 CATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG-GGGTGCCACCCA-----TTTG 65432 ||||||| || | ||||||||||| |||| || || | | | | Sbjct 125667 TATTGAGTTCGTCGCCGATCGTCTCCT------TGTTGCTCTTGGCAACGAGAAGGTCTA 125614 Query 65433 GAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTT 65492 || || | || || || ||||| ||||| ||||| ||||| ||| ||||||||||| Sbjct 125613 CAAGGCTACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTT 125554 Query 65493 CTTTGAGAAGCGAGTTGGGGACTA 65516 ||| |||||||| |||| ||||| Sbjct 125553 CTTCGAGAAGCGTGTTGCCGACTA 125530 >seq3040 Length=190208 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 27858 GCGCTCAAGGACAAGTTGTGCGATGCGATCCCCTTTCTTTACCTCAAAGTCTTTGTCTCC 27917 |||||| || |||||||| || ||||| || || | ||| ||||||||||| || Sbjct 120097 GCGCTCCAGAACAAGTTGAGCAATGCGGTCGCCCTCCTTCACCTCAAAGTCGGATTCGTT 120156 Query 27918 GTGATTGAAGAGAACGACTTTGACTTCACCTGTATAGTCGGGATCAATAACACCCGCACC 27977 || ||||| || | ||| ||||| | ||| || |||| ||| || ||||| || || Sbjct 120157 ATGGTTGAAAAGCAGGACCTTGACCTGACCGCGGTAATCGGCATCGATGACACCAGCGCC 120216 Query 27978 AACTTGAATACCATGCTTCACAGCGAGACCGGATCGTGGTGCAACACGACCAT 28030 | ||| |||||| ||||||||||||||| || |||| || |||| Sbjct 120217 TGTGTCAATGAAATGCTTGGAAGCGAGACCGGATCGAGGGGCAATGCGTCCAT 120269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596542113055680