Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3012 253 2e-62 seq2855 138 1e-27 >seq3012 Length=424931 Score = 253 bits (280), Expect = 2e-62 Identities = 1146/1789 (64%), Gaps = 53/1789 (3%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| ||||||| ||| | | ||||| || || || || || || Sbjct 44120 CCCTCAGCACATGATCATGCGTGTGTCTGTTGGTATCTGGGGTGATGATATCGAGCGAGT 44061 Query 104281 CTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTC 104338 |||||||||||| || ||||||| ||| | | | || || || | || || ||| Sbjct 44060 CTTGGAGACATATAACCTGATGTCCAGCAAATTCTTTACA--CATGCCTCTCCCACACTC 44003 Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 ||||| |||||||| || |||||| |||| ||||||| | | | | ||||| Sbjct 44002 TTCAACGCTGGTACCCCTCAGCCCCAATTGTCATCTTGCTTCTTGGTTGATATGAAGGAC 43943 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 ||| || | || ||||| | ||||| | | ||||| ||||| ||| |||| Sbjct 43942 GACAGTATTGAGGGCATCTACGATACTCTCAAGACCTGTGCCATGATCTCCAAGATGGCT 43883 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-A 104516 || |||||||| || || | || | | | || | | ||| || ||| || | Sbjct 43882 GGAGGTATTGGTCTGAACGTGCACCGTATCCGTGCTACTGG--CTCCTACATCGCCGGTA 43825 Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576 | || ||| ||| | || || |||| |||||||| || || ||| ||| || |||| Sbjct 43824 CCAACGGTACATCCAACGGCGTTGTTCCTATGCTTCGTGTCTTCAACAACACTGCTCGCT 43765 Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 |||| |||| | ||| ||| || || | || |||| || ||||| |||| Sbjct 43764 ATGTCGATCAGGGTGGCAACAAGCGACCCGGTGCTTTTGCCATCTACCTCGAGCCTTGGC 43705 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 || | ||| || | ||||||||||| | || ||||| ||| | ||||||| || Sbjct 43704 ACTCTGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAAGAGGAGGTCCGTG 43645 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || || ||| ||| || ||||| || ||||| || |||||| | ||||| ||| Sbjct 43644 CCCGTGACCTGTTCCTCGCCCTTTGGATCCCTGATCTTTTTATGAAGCGTGTTGAAAAGA 43585 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 || | ||| | || | || || || || ||||| ||| |||| | |||| Sbjct 43584 ACGGTGACTGGACACTGATGTGCCCCAACGAGTGCCCTGGCCTCGCCGACTGCTACGGTG 43525 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 ||||||| || || || ||| |||||| ||| ||| ||| | | | | || | | Sbjct 43524 AGGAGTTCGAGGCTCTGTACGAAAAGTATGAG-AAGGAGGGCAAGGGTC-GCAAGACTAT 43467 Query 104874 CA--GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 || ||| | || | | ||| | || ||||| || |||| || |||||||| | || | Sbjct 43466 CAAGGCT-CAGAAGCTTTGGTATGCCATTCTTGAGGCTCAGACTGAGACTGGAAACCCTT 43408 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || ||||| |||| ||||| || |||||||| | || ||| Sbjct 43407 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAAAAGAACCTCGGCACCATCC 43348 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || || || || || || ||||| | || | | | | || ||| ||||| | Sbjct 43347 GAAGCTCTAACCTGTGCACTGAAATTATCGAGTATTGTGCCCCTGACGAGGTCGCTGTCT 43288 Query 105051 GTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGAT-CCAGAGACAAAG 105100 | ||||| || || | ||||| || ||| || | || || | || | Sbjct 43287 GCAACCTTGCCTCTCTGGCTCTGCCTTCCTTCATCAACTACGATGAGGCCTGCTAC---G 43231 Query 105101 ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 || || | | || | ||||| || | | ||| | ||||| |||| Sbjct 43230 AC--TTCA-----AGAAGTTGCACGAGGTCAGTCAGGTTGTTATTCGCAACCTGAACAAG 43178 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | || || || ||||| || | ||||| || || ||| | ||||| Sbjct 43177 ATCATCGACGTGAACCACTACCCTGTCCCGGAGGCTCGCAACAGCAACATGCGCCACCGA 43118 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATT 105279 || |||||||||||||||||||| || || |||| ||| || || || ||| | || Sbjct 43117 CCCATTGGTCTCGGTGTTCAGGGCCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTT 43059 Query 105280 TGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGC 105339 || || ||| || || |||| || || || |||||||| || ||||| || Sbjct 43058 CGAGTCACCCGAGGCTCGTGAGCTCAACAAGCAGATCTTCGAGACCATCTACCACGCTGC 42999 Query 105340 TCTTGAGGCGA--GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGT 105397 || || || ||| |||| ||| || ||||| || ||||| |||| Sbjct 42998 CCTCACTGCCTCCGTGCAGC--TGGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGC 42941 Query 105398 TCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCAC 105457 ||||| || || | || | || || || || |||||| | | || || | | Sbjct 42940 TCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCCTCTGACCTC 42881 Query 105458 TACGACTGGGAAGCTCT-CAAGGAACGCA-TCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | |||||||| |||| | || | | | ||||| | ||| | ||||||||||| | Sbjct 42880 TGGGACTGGGAGACTCTTCGAG--AGGAAGTCAAGACACACGGTATCCGTAACAGTCTGC 42823 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 || | ||||| ||||| || ||| ||| | || || |||| || || || ||||| | Sbjct 42822 TCCTTGCTCCTATGCCTACTGCCAGTACCTCTCAGATTCTGGGCAACAACGAGTGCTTCG 42763 Query 105576 AACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCA 105635 | |||||||| | |||||||| | | || | |||||| || ||||| | |||||| Sbjct 42762 AGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTCGCTGGTGAGTTCCAGGTTGTCA 42703 Query 105636 ACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATC 105695 || || | | ||||| || || ||||| |||||| | | ||||||| | | Sbjct 42702 ACCCCTGGCTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCCGATGCTATGAAGAACC 42643 Query 105696 TCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA 105755 ||| | | | |||||||||||| || ||| | || || || | ||| Sbjct 42642 GCATCATTGCTGAGAATGGTTCCATTCAGAACATTCCCAACATCCCTGCCGATGTCAAGG 42583 Query 105756 AGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATC 105815 |||| || |||||||| || | | ||| || | |||||||| || | Sbjct 42582 CTCTGTATAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTCGTTCAGATGGCCGCTGACC 42523 Query 105816 GTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGAT 105873 | ||| ||||||||||| |||| ||| |||| || |||| | || ||||| Sbjct 42522 GAGGTGCCTTCATTGATC--AGTCCCAGTCACTGAACATCCACATGAAGGACCCCACGAT 42465 Query 105874 GTCCAAGCTCTCTTCTATGCACATGTACA-GTTGGAAGAAGGGTCTCAAAACGGGGATGT 105932 | |||| || | ||||||| | | || | |||||| |||||||| || || |||| Sbjct 42464 GGGCAAGATCACCAGTATGCAC-TTTGCAGGCTGGAAGCTTGGTCTCAAGACCGGCATGT 42406 Query 105933 ATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCAGTCTTGA 105981 | ||||| || | |||| || || |||||||||| | |||| Sbjct 42405 ACTACCTTCGCACACAGGCTGCTGCTGCTCCTATTCAGTTCACTGTTGA 42357 >seq2855 Length=139020 Score = 138 bits (152), Expect = 1e-27 Identities = 178/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || |||| || || | |||||| || || ||||| || Sbjct 126059 CTCTTCAACGCCATTGAGACCATTCCTTGCATCCGAAAGAAGGCCGACTGGGCCATCCGA 126000 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | | || | | | | ||||||| |||| ||| | || || || |||||| Sbjct 125999 TGGATCCAGGATAAGGACTCCT-CCTTTGCCCAGCGTCTCGTTGCCTTCGCTGCTGTTGA 125941 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||||||||||||| ||| |||| | |||| | |||||||||||||| |||||||| Sbjct 125940 GGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTCAT 125881 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||| || || ||||||||||||||| ||||||||||| ||||| |||||| || || Sbjct 125880 GCCCGGCCTGACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTCTCCACACTGACTT 125821 Query 94953 TGC 94955 ||| Sbjct 125820 TGC 125818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583233926258640