Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20hostae_20[genbank_20GCA_5F002234235.1_202017-07-27] 3,686 sequences; 54,581,980 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2145 91.5 9e-14 >seq2145 Length=460897 Score = 91.5 bits (100), Expect = 9e-14 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| ||||| || ||||| || ||||| || || ||| Sbjct 354314 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAA 354255 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| |||||||| || || ||||| || | |||||||| || || || Sbjct 354254 AGAGTTCGGCCGTCCTCAAGTTGCTTGCCAGCAAAGATGAGTCGCTGTTGATCGGGAGGA 354195 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | |||||||||||| ||||| Sbjct 354194 ATACCCTCCTTGTCTTGAATCTT 354172 Score = 84.2 bits (92), Expect = 1e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || ||||| |||||| |||||||| ||||| || || || || |||| ||||| || Sbjct 353780 TGAAGAGTAGACTCCTTCTGAATGTTGTAATCAGAGAGGGTGCGGCCGTCCTCAAGCTGC 353721 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || || || || ||||| || || | ||||||||||| ||| || Sbjct 353720 TTGCCAGCAAAGATCAAGCGTTGCTGGTCGGGGGGAATGCCCTCCTTGTC-CTGAATCTT 353662 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || ||||| ||| || || | ||| || || || ||||| Sbjct 353661 GGACTTGACGTTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 353602 Query 34683 TAACGTTTTCACAAAAATCTGCATGTTG 34710 || || || || || ||||||||| || Sbjct 353601 CAAGGTCTTGACGAAGATCTGCATGATG 353574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314715461362838