Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq700 131 4e-25
>seq700
Length=246488
Score = 131 bits (144), Expect = 4e-25
Identities = 316/468 (68%), Gaps = 8/468 (2%)
Strand=Plus/Plus
Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228
|| |||||| ||||||| || |||| | |||||| ||||| || | ||| | || |
Sbjct 27827 TCCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTTGAGGGTAT-CT-TCTTCAGCGGTG 27884
Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287
| ||| |||| || ||||| ||| ||| | ||||| || || | | ||||
Sbjct 27885 CCTTTGCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTA 27944
Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCA 230346
||||| ||||| ||| ||||||||||| || || | | || | | || | | ||
Sbjct 27945 ACGAGCTCATCTCTCGTGACGAGGGTCTTCA-CACCGACTTTGCCTGCCTCCTCCACTCT 28003
Query 230347 AAGCTCCAGA-ACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405
| ||| || || || | || | ||| | || | | ||||| || || || |||
Sbjct 28004 CACCTCAAGGGACGTGCCAGCAAGC-AGATGATCCAGGACATCATCACCGATGCCGTTAC 28062
Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465
| || || ||||| | ||| ||| | || ||| || | ||||||||| | |
Sbjct 28063 CATTGAGCAGAAGTTCCTCACTGAGGCTCTCCCTTGTGCTCTGCTAGGCATGAACTCGAA 28122
Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525
|| ||| ||||||||||| ||||| || || || | | || || || || ||||
Sbjct 28123 CCTCATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTGCTCGTCGCCCTCGGCAACGA 28182
Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585
||| |||||||| | | |||||||| | || |||||| ||| || ||| || ||
Sbjct 28183 GAAGGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAA 28242
Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633
||||||||| ||||| |||||||| |||||| |||| | |||||||
Sbjct 28243 GACCAACTTTTTCGAGAAGCGTGTTGCTGACTACCAGAAGGCTGGTGT 28290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057802504355180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |