Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq700 131 4e-25 >seq700 Length=246488 Score = 131 bits (144), Expect = 4e-25 Identities = 316/468 (68%), Gaps = 8/468 (2%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| ||||||| || |||| | |||||| ||||| || | ||| | || | Sbjct 27827 TCCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTTGAGGGTAT-CT-TCTTCAGCGGTG 27884 Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | ||| |||| || ||||| ||| ||| | ||||| || || | | |||| Sbjct 27885 CCTTTGCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTA 27944 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCA 230346 ||||| ||||| ||| ||||||||||| || || | | || | | || | | || Sbjct 27945 ACGAGCTCATCTCTCGTGACGAGGGTCTTCA-CACCGACTTTGCCTGCCTCCTCCACTCT 28003 Query 230347 AAGCTCCAGA-ACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGA 230405 | ||| || || || | || | ||| | || | | ||||| || || || ||| Sbjct 28004 CACCTCAAGGGACGTGCCAGCAAGC-AGATGATCCAGGACATCATCACCGATGCCGTTAC 28062 Query 230406 AAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGA 230465 | || || ||||| | ||| ||| | || ||| || | ||||||||| | | Sbjct 28063 CATTGAGCAGAAGTTCCTCACTGAGGCTCTCCCTTGTGCTCTGCTAGGCATGAACTCGAA 28122 Query 230466 ACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGA 230525 || ||| ||||||||||| ||||| || || || | | || || || || |||| Sbjct 28123 CCTCATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTGCTCGTCGCCCTCGGCAACGA 28182 Query 230526 GAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAA 230585 ||| |||||||| | | |||||||| | || |||||| ||| || ||| || || Sbjct 28183 GAAGGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAA 28242 Query 230586 GACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGT 230633 ||||||||| ||||| |||||||| |||||| |||| | ||||||| Sbjct 28243 GACCAACTTTTTCGAGAAGCGTGTTGCTGACTACCAGAAGGCTGGTGT 28290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057802504355180