Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq700 114 1e-20 >seq700 Length=246488 Score = 114 bits (126), Expect = 1e-20 Identities = 354/544 (65%), Gaps = 19/544 (3%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || |||||||| || |||| |||||||| || || ||| Sbjct 27969 CCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGGCATGAGACCACGCTTC 27910 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | || || | || ||||| |||||||| || | ||||| Sbjct 27909 TTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTCAACAGCAGCAAAG 27850 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || | | || | ||| | | | || |||| | |||||| |||| || Sbjct 27849 GCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCCATCGAATAGCCCAATCA 27790 Query 17165 GCTTTTTGCTTT---ATGCAATCCATCGTTTCTATGGCCTTAAA----TAATTTCTCTTT 17217 || || |||| |||||| || || || | ||| || || ||| |||||| Sbjct 27789 GCCTT---CTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGGTAAGTTCTCTGA 27733 Query 17218 TTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276 | ||| || | || || || || ||||| || ||| |||||||||| |||| Sbjct 27732 -----GCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTTTCGGAGTGGATGT 27678 Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336 ||||||| ||||| || ||||| |||||||| || || | || ||||| || || Sbjct 27677 TCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGATCTGAACCTCGCCGC 27618 Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA 17396 |||||| || | || || ||||| || || || ||| ||||| || || || | | Sbjct 27617 TGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGGCAAAGAAAGCAAGAA 27558 Query 17397 TATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA---ACGCGCCAGTCCTTTAAATCTT 17453 | || ||||| || | ||||||| || ||| | |||||| | | ||| | Sbjct 27557 TGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCCAGTCATGGAGATCCT 27498 Query 17454 TGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCC 17513 |||| | ||| | || |||| ||||| || |||| | ||||| || ||||| | || Sbjct 27497 TGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCGGCCTTCTTGTACATTTGCC 27438 Query 17514 AAAT 17517 | || Sbjct 27437 AGAT 27434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517535339658480