Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq700 109 6e-19
>seq700
Length=246488
Score = 109 bits (120), Expect = 6e-19
Identities = 365/567 (64%), Gaps = 17/567 (3%)
Strand=Plus/Minus
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
|| || || |||||| || || || ||||| | ||| || ||||| || |||||
Sbjct 27993 AGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTC 27934
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318
| || ||||| || || ||||| | |||||| || | |||||| | || |||
Sbjct 27933 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAG 27874
Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378
|| ||||||||||||| ||||| || | | || | || | | || | || |
Sbjct 27873 AAGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCC 27814
Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438
| |||||| |||| || || || | | || ||| || || || | |||
Sbjct 27813 TGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCG 27754
Query 16439 TTAAACA----ATTTCTCTTTTTCCTGAATA---TCGATTATATACGTATCAATCAGTAA 16491
|| || | | |||||| || | || | || || || ||||| || |
Sbjct 27753 TTGAAGAGGTAAGTTCTCT-------GAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG 27701
Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551
| ||| |||| ||||| |||||||| || ||||| || || ||||||||||||||
Sbjct 27700 AGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGC 27641
Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611
||| | || || || || || ||||| || | |||||||| || || ||||| ||
Sbjct 27640 CTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATC 27581
Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGA-- 16669
|| ||||| || || | ||||| ||||| || | ||||| | || |||
Sbjct 27580 GGAGGCGGCAAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACG 27521
Query 16670 -ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728
| | ||| || | | ||| ||||| | ||| | || || | ||||| ||| |||
Sbjct 27520 GTTGTTCCAGTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGC 27461
Query 16729 CACTGCCTTTTTATACATTTTCCAAAT 16755
| | ||||| || ||||||| ||| ||
Sbjct 27460 CTCGGCCTTCTTGTACATTTGCCAGAT 27434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511404261209520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |