Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq700 109 6e-19 >seq700 Length=246488 Score = 109 bits (120), Expect = 6e-19 Identities = 365/567 (64%), Gaps = 17/567 (3%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || || |||||| || || || ||||| | ||| || ||||| || ||||| Sbjct 27993 AGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTC 27934 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| || || ||||| | |||||| || | |||||| | || ||| Sbjct 27933 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAG 27874 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || ||||||||||||| ||||| || | | || | || | | || | || | Sbjct 27873 AAGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCC 27814 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 | |||||| |||| || || || | | || ||| || || || | ||| Sbjct 27813 TGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCG 27754 Query 16439 TTAAACA----ATTTCTCTTTTTCCTGAATA---TCGATTATATACGTATCAATCAGTAA 16491 || || | | |||||| || | || | || || || ||||| || | Sbjct 27753 TTGAAGAGGTAAGTTCTCT-------GAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG 27701 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 | ||| |||| ||||| |||||||| || ||||| || || |||||||||||||| Sbjct 27700 AGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGC 27641 Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 ||| | || || || || || ||||| || | |||||||| || || ||||| || Sbjct 27640 CTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATC 27581 Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGA-- 16669 || ||||| || || | ||||| ||||| || | ||||| | || ||| Sbjct 27580 GGAGGCGGCAAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACG 27521 Query 16670 -ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728 | | ||| || | | ||| ||||| | ||| | || || | ||||| ||| ||| Sbjct 27520 GTTGTTCCAGTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGC 27461 Query 16729 CACTGCCTTTTTATACATTTTCCAAAT 16755 | | ||||| || ||||||| ||| || Sbjct 27460 CTCGGCCTTCTTGTACATTTGCCAGAT 27434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511404261209520