Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq700 149 7e-31
seq839 114 2e-20
>seq700
Length=246488
Score = 149 bits (164), Expect = 7e-31
Identities = 368/557 (66%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| || || ||| ||| ||||||||||| | | || | ||||| || || || ||
Sbjct 27990 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGA 27931
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|||||||| || |||||||| || ||||| || ||||| ||||| | || |||||
Sbjct 27930 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAG 27871
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCA---TAACCGGCGCTGTCATGT 24311
|| || || || || |||||||||| ||| | | || || | |||| ||
Sbjct 27870 ATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGG 27811
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371
||||| ||||||||| ||||||||| | ||||| || || || | || ||
Sbjct 27810 ATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTG 27751
Query 24372 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 24431
||||| || || | | | | || || | || || ||||| | ||| || ||
Sbjct 27750 AAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTT 27691
Query 24432 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 24491
|| || || ||||| || || || || || |||||||| |||| |||||| | |||
Sbjct 27690 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGATC 27631
Query 24492 TGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 24551
|| || || | ||||| || | | || || || || || || || ||| |||
Sbjct 27630 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGGCA 27571
Query 24552 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAA 24608
|| || || | | || || || || | ||||| | |||| | || |||||
Sbjct 27570 AAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCCAG 27511
Query 24609 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 24668
|||| || ||| || || | ||| | || || ||||||| || || ||||| |||||
Sbjct 27510 TCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCGGCCTTC 27451
Query 24669 TTATACATATTCCAGAT 24685
|| ||||| | ||||||
Sbjct 27450 TTGTACATTTGCCAGAT 27434
>seq839
Length=23613
Score = 114 bits (126), Expect = 2e-20
Identities = 506/790 (64%), Gaps = 16/790 (2%)
Strand=Plus/Minus
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 53769
|| || || || ||||| || ||||||| || | | ||| || | || |||||||||||
Sbjct 13357 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGC-GCAGTACTCAATAATCTCAGTGCA 13299
Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829
|| || | |||||| || | || | ||| || ||||| ||| || |||
Sbjct 13298 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 13239
Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889
||| || || ||||| || | ||||| || |||||| || | ||| || | ||| |
Sbjct 13238 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAG 13179
Query 53890 GACACGAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTA--TAGTGTATAC 53944
||||||| || ||| ||| | ||| ||||| ||||| | ||| |
Sbjct 13178 CTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAG 13122
Query 53945 AATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACAT 54003
| | || ||||| || || | || | ||| ||||| || || | || |||||
Sbjct 13121 AGCC--TCGAACTCATCACCGTAG-CAGTCAGCAAGACCAGGGCACTCGTTGGGGCACAT 13065
Query 54004 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 54063
| | ||| || || | | || || || ||||| ||||||||||| |||||||| ||
Sbjct 13064 AAGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGC 13005
Query 54064 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 54123
| || || || | | | ||||| || || |||||| ||||| |||||
Sbjct 13004 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945
Query 54124 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTT 54183
| | | | ||| | ||||| || || | ||| || | | | ||||| || |||||
Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTT 12885
Query 54184 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 54243
|| ||||| || | ||| | ||| ||||| || | || | || ||| |||| | |||
Sbjct 12884 GCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACC 12825
Query 54244 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 54303
|| || | |||||||||||||| || || || ||||||| || | | |
Sbjct 12824 GTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGAT-TCGGTGGACGT 12766
Query 54304 T-AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362
| | || || || || ||||| || || || | || || || | ||||| ||||
Sbjct 12765 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGA 12706
Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422
| || || || || || ||| |||| | || || || || |||| || | ||
Sbjct 12705 TACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAG 12646
Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 54482
|| || || || |||| || || ||||| || || || | || ||| | || |
Sbjct 12645 GGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAGGT 12586
Query 54483 TGTACGTCTC 54492
|||| |||||
Sbjct 12585 TGTATGTCTC 12576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593709829469280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |