Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq700 134 3e-26 seq839 105 1e-17 >seq700 Length=246488 Score = 134 bits (148), Expect = 3e-26 Identities = 119/149 (80%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||||||||||||||| ||||| || |||||||| || ||||| || || |||||||||| Sbjct 27843 TTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCT 27902 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | ||| | |||| ||||| || | ||| || ||| |||| ||| | | Sbjct 27903 GGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTG 27962 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGC 102064 |||| |||||||| ||||||||| ||| Sbjct 27963 ACGAGGGTCTTCACACCGACTTTGCCTGC 27991 >seq839 Length=23613 Score = 105 bits (116), Expect = 1e-17 Identities = 177/251 (71%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||||| || || || ||| || ||||| || ||||| || ||| Sbjct 12754 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCGATG 12695 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910 || || || | | | | ||||||||| ||||| || || || ||| | | ||| Sbjct 12694 CTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGC-TGAGGGGTACCAGC 12636 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 || || ||||||||||||||||| || || | | || |||||||| | ||||| || Sbjct 12635 GTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAGGTTGTATGTCTC 12576 Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029 | |||| || ||| || | | || | || || ||||| |||||||| ||||||| | Sbjct 12575 CAAGACACGTTCGATATCATCACCCCAG-ATACCAACAGCAACACGCATGATCATGTGTT 12517 Query 95030 GAGGGCGCTCA 95040 |||| |||||| Sbjct 12516 GAGGACGCTCA 12506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989563891034630