Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq700 134 3e-26
seq839 105 1e-17
>seq700
Length=246488
Score = 134 bits (148), Expect = 3e-26
Identities = 119/149 (80%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||||||||||||||| ||||| || |||||||| || ||||| || || ||||||||||
Sbjct 27843 TTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCT 27902
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| ||||||| | ||| | |||| ||||| || | ||| || ||| |||| ||| | |
Sbjct 27903 GGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTG 27962
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGC 102064
|||| |||||||| ||||||||| |||
Sbjct 27963 ACGAGGGTCTTCACACCGACTTTGCCTGC 27991
>seq839
Length=23613
Score = 105 bits (116), Expect = 1e-17
Identities = 177/251 (71%), Gaps = 4/251 (2%)
Strand=Plus/Minus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| ||||||| || || || ||| || ||||| || ||||| || |||
Sbjct 12754 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCGATG 12695
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT-CCACA 94910
|| || || | | | | ||||||||| ||||| || || || ||| | | |||
Sbjct 12694 CTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGC-TGAGGGGTACCAGC 12636
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|| || ||||||||||||||||| || || | | || |||||||| | ||||| ||
Sbjct 12635 GTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAGGTTGTATGTCTC 12576
Query 94971 AATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCT 95029
| |||| || ||| || | | || | || || ||||| |||||||| ||||||| |
Sbjct 12575 CAAGACACGTTCGATATCATCACCCCAG-ATACCAACAGCAACACGCATGATCATGTGTT 12517
Query 95030 GAGGGCGCTCA 95040
|||| ||||||
Sbjct 12516 GAGGACGCTCA 12506
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989563891034630
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |