Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq700 167 3e-36
seq839 154 2e-32
>seq700
Length=246488
Score = 167 bits (184), Expect = 3e-36
Identities = 372/557 (67%), Gaps = 6/557 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || || ||| ||| ||||||||||| | | || || ||||| || || || ||
Sbjct 27990 CAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGA 27931
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|||||||| || |||||||| || ||||| || ||||| ||||| | || ||||||
Sbjct 27930 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAG 27871
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCA---TAACTGGCGCTGTCATGT 50136
|| || || || || |||||||||||||| | || || || | |||| ||
Sbjct 27870 ATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGG 27811
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196
||||| ||||||||| ||||||||| | ||||| || || || | ||| ||
Sbjct 27810 ATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTG 27751
Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256
||||| || || | | | | || || | || || || || | ||| || ||
Sbjct 27750 AAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTT 27691
Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316
|| || || ||||| || || ||||| || |||||||| |||| |||||| | |||
Sbjct 27690 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGATC 27631
Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376
|| || || | ||||| ||| | | || || || || || || || ||| |||
Sbjct 27630 TGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGGCA 27571
Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAA 50433
|| || || | | || || || | | |||| | |||| | || |||||
Sbjct 27570 AAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCCAG 27511
Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493
|||| || ||| || || | ||| | || || ||||||| || || ||||| |||||
Sbjct 27510 TCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCGGCCTTC 27451
Query 50494 TTATACATATTCCAGAT 50510
|| ||||| | ||||||
Sbjct 27450 TTGTACATTTGCCAGAT 27434
>seq839
Length=23613
Score = 154 bits (170), Expect = 2e-32
Identities = 556/854 (65%), Gaps = 18/854 (2%)
Strand=Plus/Minus
Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATTTCAGTGCA 79679
|| || || || ||||| || ||||||| || | | ||| || | || || ||||||||
Sbjct 13357 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGC-GCAGTACTCAATAATCTCAGTGCA 13299
Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739
||||| | ||||| || | || | ||| || ||||| ||| || |||
Sbjct 13298 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 13239
Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799
||| || || ||||| || | ||||| || |||| | || | ||| || | ||| |
Sbjct 13238 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAA- 13180
Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCTCTTT---TCTCTTTCGTA-TTGT-GTATA 79853
| || ||||||| || ||||||| | ||| ||||| ||||| || | ||| |
Sbjct 13179 GCTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACA 13123
Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| | |||||||| || || | || | | ||||| || |||| || |||||
Sbjct 13122 GAGCC--TCGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACAT 13065
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
| | ||| || |||| | || || || ||||| ||||||||||| |||||||| ||
Sbjct 13064 AAGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGC 13005
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
| || || || | | | |||||| || || |||||| ||||| |||||
Sbjct 13004 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| | | | ||| | ||||| || || | ||| || || | | || ||||| |||||
Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTT 12885
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | ||| ||||| || | || | || ||| |||| | |||
Sbjct 12884 GCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACC 12825
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213
|| || |||||||||||||||| || || || ||||||| || | | |
Sbjct 12824 GTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGAT-TCGGTGGACGT 12766
Query 80214 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 80272
| | || || || || ||||| || || || | || || || | ||||| ||||
Sbjct 12765 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGA 12706
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| || || ||||| || || |||| | || || || || |||| || | ||
Sbjct 12705 TACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAG 12646
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392
|| || || || |||| || || ||||| || || || | || ||||| || |
Sbjct 12645 GGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAGGT 12586
Query 80393 TGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATT 80451
|||| ||||| | | ||| ||||| || | || || || || ||||||||
Sbjct 12585 TGTATGTCTCCAAGACACGTTCGATATCATCACCCCAG-ATACCAACAGCAACACGCATG 12527
Query 80452 AACATGTGCTGAGG 80465
| |||||| |||||
Sbjct 12526 ATCATGTGTTGAGG 12513
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718254560321040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |