Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq839 132 6e-26
>seq839
Length=23613
Score = 132 bits (146), Expect = 6e-26
Identities = 511/790 (65%), Gaps = 16/790 (2%)
Strand=Plus/Minus
Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAA 71763
|| || || || ||||| || ||||||| || | || || | ||||| ||||||||
Sbjct 13357 GAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCAC 13298
Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823
|| || | |||||| || | || | ||| || ||||| ||| || ||||
Sbjct 13297 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 13238
Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 71883
|| || || || || || | ||||| || |||| | || | ||| || | ||| | |
Sbjct 13237 TTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAA-G 13179
Query 71884 ACTC-GAGCCTTTATTATATTCTTGTATCTCTTT---TCTCTTTCGTA-TTGT-GTATAT 71937
|| ||||||| || | |||| | ||| ||||| ||||| || | ||| |
Sbjct 13178 CTTCTGAGCCTTGAT---AGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAG 13122
Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAAT-CCAGGACATTCATTCGGACACAT 71996
| | |||||||| || || | ||| | || ||||| || || || || |||||
Sbjct 13121 AGCC--TCGAACTCATCACCGTA-GCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACAT 13065
Query 71997 CAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 72056
| | ||| || |||| | | || || ||||| ||||||||||| |||||||| ||
Sbjct 13064 AAGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGC 13005
Query 72057 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 72116
| || || || | | | |||||| || || |||||| ||||| |||||
Sbjct 13004 CAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAA 12945
Query 72117 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTT 72176
| | | | ||| | ||||| || || | ||| || || | | || || || |||||
Sbjct 12944 CTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTT 12885
Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236
|| ||||| || | ||| | ||| ||||| || | || | || ||| |||| | |||
Sbjct 12884 GCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACC 12825
Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296
|| || | |||||||||||||| || || || ||||||| || | | | |
Sbjct 12824 GTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGAT-TCGGTGGACGT 12766
Query 72297 T-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 72355
| | || || || || ||||| || || || | || || || | ||||| ||||
Sbjct 12765 TCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGA 12706
Query 72356 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 72415
| || || || || || ||| |||| | || || || || |||| || | ||
Sbjct 12705 TACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAG 12646
Query 72416 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 72475
|| || || || |||| || || ||||| || || || | || ||||| || |
Sbjct 12645 GGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTAGACATGAGGT 12586
Query 72476 TGTACGTCTC 72485
|||| |||||
Sbjct 12585 TGTATGTCTC 12576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671125894665360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |