Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq700 304 2e-77
seq839 143 4e-29
>seq700
Length=246488
Score = 304 bits (336), Expect = 2e-77
Identities = 582/844 (69%), Gaps = 23/844 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| ||||| ||||| | ||| ||| |||||||
Sbjct 27434 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 27493
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || | || ||| | | ||| | |||| |||| | || || ||
Sbjct 27494 TCCAAGGATCTCCATGACTGGAACAACCGTCTAACTGCGGACGAGCAGTACTTCATCTCC 27553
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
|||||| | || |||||||||| ||||||||| || |||||||| || || ||||| ||
Sbjct 27554 CACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAACCTTGTTGAG-CG 27612
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
|||| ||| | || || |||| ||| ||||| ||||| ||||| |||||||
Sbjct 27613 ATTCAGCGGCGAGGTTCAGATCCCTGAGGC-TCGATGCTTCTACGGTTTCCAGATCATGA 27671
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315
| |||||| | ||||| |||| |||||| || ||||||| ||||| || || |
Sbjct 27672 TGGAGAACATCCACTCCGAAACATACTCTCTGCTCATTGACACCTACATCAAGGAGCCTG 27731
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
| | ||| | ||||| ||||| | ||||| | || | || || || ||||||
Sbjct 27732 CTCAGAGAACTTAC-CTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCT 27790
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| ||||| |||||| | ||| | || ||||| | ||| | | || || ||
Sbjct 27791 GATTGGGCTATTCGATGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGTCTTGTTGCC 27850
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
|| || || || ||||| |||||||| ||| ||||| |||| || |||||||||
Sbjct 27851 TTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCTGGCTCAAG 27910
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || ||||||||||| ||||| | ||||||| | || ||||| ||||||||
Sbjct 27911 AAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGT 27970
Query 125556 CTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCC 125615
|| ||| ||||||||| || || | ||| | | | | || | | ||
Sbjct 27971 CTTCACACCGACTTTGCCTGCCTCCT------CCACTCT---CACCTCAAGGGACGTGCC 28021
Query 125616 AGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTA 125675
||| | | | | || |||| | ||||||||||| | || || || |||| ||
Sbjct 28022 AGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGAAGTTCCTC 28081
Query 125676 ACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACAT 125734
|| || | || || | || || | |||||||||| || || ||| |||||||
Sbjct 28082 ACTGAGGCTCT-CCCTTGTGCTCTGCTAGGCATGAACTCGAACCTCATGAAGCAGTACAT 28140
Query 125735 AGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAACGC 125791
||||| || || |||||||| || || | ||| || ||| | ||||| ||
Sbjct 28141 CGAGTTCGTCGCTGATCGTCTGCT---CGTCGCCCTCGGCAACGAGAAGGTGTACAAGGC 28197
Query 125792 CAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGA 125851
|| || ||||| || |||||| | ||| || || | || |||||||||||||||||
Sbjct 28198 CACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTTTTCGA 28257
Query 125852 GAAG 125855
||||
Sbjct 28258 GAAG 28261
>seq839
Length=23613
Score = 143 bits (158), Expect = 4e-29
Identities = 318/475 (67%), Gaps = 8/475 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || || | || ||||| | || || |||||||| ||
Sbjct 12876 CAGGGTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTCGAGCCCTGGCACGCCGAT 12935
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || | || || ||| || || |||| || || | |||
Sbjct 12936 GTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGAC 12995
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || || ||| | || ||| | ||||||||||| ||| | | |||| |
Sbjct 12996 CTGTTCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAATGGCGAA 13055
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || || ||||| | || |||| || || |||||
Sbjct 13056 TGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATGAGTTC 13115
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACG- 97174
||||| |||| | |||||| |||||| || | | | |||| || | |
Sbjct 13116 GAGGCTCTGTACGAGAAGTACGAGAGAGAGGG----TAAGGGTCGCAAGTCTATCAAGGC 13171
Query 97175 --AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
|||| || ||| | ||||| | ||| ||| ||||||||||| || | ||| ||
Sbjct 13172 TCAGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGGAAACCCTTTCATGCT 13231
Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291
|||||||||| | || ||||| ||||||||| || | || |||||| ||||
Sbjct 13232 CTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAGCTC 13291
Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346
||| |||||||| || ||| | |||||| | |||| || ||| || ||||||
Sbjct 13292 CAACCTGTGCACTGAGATTATTGAGTACTGCGCTCCTGATGAGGTCGCTGTTTGC 13346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741044508501360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |