Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq810 89.7 3e-13 >seq810 Length=454684 Score = 89.7 bits (98), Expect = 3e-13 Identities = 167/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 25797 ||||| || || ||| || | ||| |||| | | ||| |||||| || || || Sbjct 151724 AGCTGGTCTACACCCTGACCGGTGTAATCTGTCTTGGCGTCGACGTACTCGGCGCCAAAG 151783 Query 25798 TACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCC 25857 | | ||| ||||| |||||||| || |||||||| ||| | || | ||| | || || Sbjct 151784 TGTCGCCATTGGAAGCCGTACACAGGGCCTAGGTCGCCAACCTCACGGTGTTGAAGACCA 151843 Query 25858 CTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT--TACCCCCTTCTCGG 25915 ||||| | || || | ||||||||| | ||||||||||| |||| | || | | Sbjct 151844 AGGTTATCGAGGAACTCGCGAGAACCATTGCCATCCCAGATCTTGATACCAGCCTCACTG 151903 Query 25916 AGAGCTCTTTGGAG-TTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973 || |||||| | || ||| |||||| || ||||| || |||||||| ||||||| Sbjct 151904 AG-GCTCTTGGAAGAGGTGT-TACCCTC-GATAAACCAGAGGAGCTCCGCAATGACGGC 151959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340131025352778