Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq810 89.7 3e-13
>seq810
Length=454684
Score = 89.7 bits (98), Expect = 3e-13
Identities = 167/239 (70%), Gaps = 6/239 (3%)
Strand=Plus/Plus
Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 25797
||||| || || ||| || | ||| |||| | | ||| |||||| || || ||
Sbjct 151724 AGCTGGTCTACACCCTGACCGGTGTAATCTGTCTTGGCGTCGACGTACTCGGCGCCAAAG 151783
Query 25798 TACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCC 25857
| | ||| ||||| |||||||| || |||||||| ||| | || | ||| | || ||
Sbjct 151784 TGTCGCCATTGGAAGCCGTACACAGGGCCTAGGTCGCCAACCTCACGGTGTTGAAGACCA 151843
Query 25858 CTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT--TACCCCCTTCTCGG 25915
||||| | || || | ||||||||| | ||||||||||| |||| | || | |
Sbjct 151844 AGGTTATCGAGGAACTCGCGAGAACCATTGCCATCCCAGATCTTGATACCAGCCTCACTG 151903
Query 25916 AGAGCTCTTTGGAG-TTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACGGC 25973
|| |||||| | || ||| |||||| || ||||| || |||||||| |||||||
Sbjct 151904 AG-GCTCTTGGAAGAGGTGT-TACCCTC-GATAAACCAGAGGAGCTCCGCAATGACGGC 151959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340131025352778
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |