Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq839 430 3e-115 seq700 104 6e-17 >seq839 Length=23613 Score = 430 bits (476), Expect = 3e-115 Identities = 1180/1781 (66%), Gaps = 70/1781 (4%) Strand=Plus/Plus Query 363414 ATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 ||| ||||||| | || | ||| | |||| ||| || || || || ||| | ||||| Sbjct 12473 ATCATACCTATTGCAGATTGACGGTAAAATTGCTGAGCGTCCTCAACACATGATCATGCG 12532 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCG--CGATT----GAAACATATAA 363527 ||||||| |||||||| || || || |||| || || | || ||||| || Sbjct 12533 TGTTGCTGTTGGTATC---TG---GGGTGATGATATCGAACGTGTCTTGGAGACATACAA 12586 Query 363528 GCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAA 363583 || |||| || || | ||||| || || | || ||| | | ||| ||||| | Sbjct 12587 CCTCATGTCTA---GCAAGT-TCTTCACTCATGCTTCCCCCACACTATTCAACGCTGGTA 12642 Query 363584 CTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGG 363643 | | | | || ||| |||| || ||||| ||| | | |||||||| || |||||| | Sbjct 12643 CCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTGATATGAAGGAGGACAGCATCGACG 12702 Query 363644 GTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTG 363703 |||||| || || || |||| |||||| | |||||||||| || || || ||||| Sbjct 12703 GTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCT 12762 Query 363704 T-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGGGATACT- 363760 | | || ||||| | ||||| || | | ||||||| ||| || || |||| Sbjct 12763 TGAACG-TCCACCGAATCCGTGCCACCGG-CTCTTACATTGCCGGGACCAATGG-TACTT 12819 Query 363761 CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGG 363820 | || || | ||||||||||| |||||||| |||| ||||| | ||||||||||||| Sbjct 12820 CTAACGGTGTCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTCGACCAGG 12879 Query 363821 GTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTT 363880 |||| ||||| || || || ||||| || |||||||| || |||||| | | Sbjct 12880 GTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTCGAGCCCTGGCACGCCGATGTCT 12939 Query 363881 TTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGT 363940 | ||||| ||||| ||||| || ||| || || ||||| | || || ||||| |||| Sbjct 12940 TCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGACCTGT 12999 Query 363941 TCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAAT---- 363996 || || |||||| | |||| | || |||||||| || ||| |||||| Sbjct 13000 TCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAG------AAGAATGGCG 13053 Query 363997 --TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACT 364054 ||| | || | ||||| |||| || || |||||| | || | ||||| || | Sbjct 13054 AATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATGAGT 13113 Query 364055 ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCAC 364114 | ||||| ||||| ||||| || ||||| |||| ||| ||| | || || | Sbjct 13114 TCGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTCGCAAGTCTATCAAGGCTC 13173 Query 364115 AGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTAT-ATGTTG 364173 ||||||| |||| |||||| | || | |||| ||||| |||| ||||| | ||| | Sbjct 13174 AGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGGAA-ACCCTTTCATGCTC 13232 Query 364174 TACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AG 364232 ||||| ||| |||||||||||| |||||| || |||||||||| | || | || Sbjct 13233 TACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCA-TCCGAAGCTC 13291 Query 364233 CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCT 364292 |||||| || || ||||||||||| ||| |||||| || ||| || || || ||||| Sbjct 13292 CAACCTGTGCACTGAGATTATTGAGTACTGCGCTCCTGATGAGGTCGCTGTTTGCAACCT 13351 Query 364293 TGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGATGGTACTTTTGACCACCAGCA 364346 ||| || | | || || | || | | |||||| | | ||| | || | Sbjct 13352 TGCCTCCTTGTCTCTGCCCTCTTTCATCAACTACGAAGATGCTGTCTACGACTTCAAGAA 13411 Query 364347 TCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAAT 364404 || | || || || | || | | | |||| || ||||| |||||||| ||| Sbjct 13412 GCTGCACGAGGTCACTCAAGTCGTTGTCC--GCAACCTGAACAAGATTATCGACGTGAAC 13469 Query 364405 TATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTGGTC 364459 | || || | | || || || ||| || |||||||| || || ||||||| Sbjct 13470 CACTACCCTGTCCAAGAGGCTCGCAACAGC-----AACATGCGTCACCGACCCATTGGTC 13524 Query 364460 TTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTG 364519 ||||||| || || || ||||| | || | ||| ||| | ||||| || || | Sbjct 13525 TTGGTGTTCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCGCATGCCCTTTGAGTCTCCCG 13584 Query 364520 ACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTT 364579 | ||||||| || || ||| | ||||| || || || || || || | || ||| Sbjct 13585 AGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCCCTTACCACTT 13644 Query 364580 CGTGT-GATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCG 364638 | ||| | | || || |||| ||||| || | |||| || ||| || Sbjct 13645 C-TGTACAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCTTCAAGGGCTCTCCTGCCTCT 13703 Query 364639 CAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGAT 364698 |||| | |||||||||| | |||||||||| ||| |||| || ||| | ||||| Sbjct 13704 GAGGGTATTCTCCAGTTTGACATGTGGAATGTCAAGCCTTCTGACCTTTGGGAGTGGGAA 13763 Query 364699 ACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TC-CCTCGTTACAGCGCCC 364755 | || || | || |||| || |||| |||||| || |||||| || || Sbjct 13764 TCCCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACAGTCTGCTCGTT---GCTCCT 13820 Query 364756 ATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACA 364815 ||||| || || ||| | ||||| || || ||||||||||||||||| || | ||| Sbjct 13821 ATGCCTACTGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTATACC 13880 Query 364816 AGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTA 364875 ||| | || |||||| || ||| | || || || | ||| || || | || Sbjct 13881 TCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCCAGGTTGTCAACCCCTGGCTT 13940 Query 364876 GTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCC 364935 ||||||||||| |||| || || ||| || ||||||||| |||||| || Sbjct 13941 CTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGCTATGAAGAACCGTATCATTGCT 14000 Query 364936 GCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995 | || |||||| | |||||||| || | || | ||| | ||| || | ||||| Sbjct 14001 GAGAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGATGTCAAGGCTCTGTACAAG 14060 Query 364996 ACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTT 365055 || || ||||| ||||| |||| | | | ||||| ||||| || ||||| ||| Sbjct 14061 ACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGGCTGCCGACCGTGGTGCCTTT 14120 Query 365056 ATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACA 365115 || |||| ||||| | ||| | ||||| | || || | |||| | || Sbjct 14121 ATTGATCAGTCTCAGTCTCTCAACATTCACATGAAGGACCCTACAATGGGCAAGATCACC 14180 Query 365116 TCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||| ||| || ||||| ||||| ||||| || Sbjct 14181 AGCATGCACTTCGCTGGCTGGAAGCTTGGTCTCAAGACCGG 14221 >seq700 Length=246488 Score = 104 bits (114), Expect = 6e-17 Identities = 292/440 (66%), Gaps = 15/440 (3%) Strand=Plus/Plus Query 22213 ATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGT-GACTAATTT 22271 ||||| || |||||||| || | || ||||| || ||||| || || || ||| Sbjct 27557 ATTCTTGCTTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAACCTTGTTGAGCGATTC 27616 Query 22272 TGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGA 22331 || | || |||| ||| ||||| |||| ||||| ||| | || || ||||| || Sbjct 27617 AGCGGC-GAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATGGA 27675 Query 22332 AAATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGAC-G 22390 || | ||| | |||||||| ||| || | || | || | || | | || | | Sbjct 27676 GAACATCCACTCCGAAACATACTCTCTGCT----CATTGACACCTACATCAAGGAGCCTG 27731 Query 22391 AACAACGAA---ACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAG 22447 || ||| || | ||| ||| || |||||||| | || || ||||| | Sbjct 27732 CTCAGAGAACTTACCTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGCTG 27791 Query 22448 ATTGGGCGCTGAAATGGAT---GAACAATGAACG-TTCATTCGCGGAACGTCTTATTGCA 22503 ||||||| | |||||| | |||| |||| ||| || || | |||||| |||| Sbjct 27792 ATTGGGCTATTCGATGGATCCAGGACAA-GAACTCTTCCTTTGCCCAGCGTCTTGTTGCC 27850 Query 22504 TTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaa 22563 ||||||| ||||| || || ||||| || || ||| | | || || ||||| || Sbjct 27851 TTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCTGGCTCAAG 27910 Query 22564 aaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGT 22623 || |||| | ||||| ||||| || || || || ||| | || || || |||||| Sbjct 27911 AAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAGGGT 27970 Query 22624 CTTCATACCGATTTTGCGTG 22643 ||||| ||||| ||||| || Sbjct 27971 CTTCACACCGACTTTGCCTG 27990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303327115040252