Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1265 140 2e-28
seq700 96.9 2e-15
>seq1265
Length=8425
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2935 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2876
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 2875 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2841
>seq700
Length=246488
Score = 96.9 bits (106), Expect = 2e-15
Identities = 202/297 (68%), Gaps = 8/297 (3%)
Strand=Plus/Minus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252
|| || ||||| || ||||| ||| ||| ||||| ||||| |||| ||||| ||||
Sbjct 86838 GATGCTTTCTATCGTTACAAGATGGAGCG--TCTGCAGACCAAGATCGAAGGTAAAGGAA 86781
Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGGACGCCC 6310
||||||| || |||||| |||||||| | | | | || || | |||| || ||
Sbjct 86780 ACGGTATCAAGACCGTCGTTGTCAACCT--CAGCAGCGTTGCAGCCTCACTCGCCCGTCC 86723
Query 6311 TGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCA 6370
| | ||||| | || || || || | ||||||||| || || || | |||| |
Sbjct 86722 CGGCTCCTACGTCATCAAGTACTTTGGTTTCGAACTTGGTGCCCAAACCAACATTGACCC 86663
Query 6371 CAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACT 6430
||| |||| |||| ||| | ||||| | || | || ||||||| ||||| ||
Sbjct 86662 CAAGGACGACCGCTGGATCATCAACGGTGCCCACGATGCTCCCAAGCTCCAGGATCACCT 86603
Query 6431 TGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
|| ||||| || |||||| || || || | ||| | ||||| ||||||||
Sbjct 86602 CGATGGCTTCATCAACAAGTTCGTTCTCTGCAAAAAGTGCAAGAACCCTGAGACCGA 86546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334940725679966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |