Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1265 140 2e-28 seq700 96.9 2e-15 >seq1265 Length=8425 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2935 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2876 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2875 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2841 >seq700 Length=246488 Score = 96.9 bits (106), Expect = 2e-15 Identities = 202/297 (68%), Gaps = 8/297 (3%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAA 6252 || || ||||| || ||||| ||| ||| ||||| ||||| |||| ||||| |||| Sbjct 86838 GATGCTTTCTATCGTTACAAGATGGAGCG--TCTGCAGACCAAGATCGAAGGTAAAGGAA 86781 Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAA--GTCGCTAAGGCGCTCGGACGCCC 6310 ||||||| || |||||| |||||||| | | | | || || | |||| || || Sbjct 86780 ACGGTATCAAGACCGTCGTTGTCAACCT--CAGCAGCGTTGCAGCCTCACTCGCCCGTCC 86723 Query 6311 TGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCA 6370 | | ||||| | || || || || | ||||||||| || || || | |||| | Sbjct 86722 CGGCTCCTACGTCATCAAGTACTTTGGTTTCGAACTTGGTGCCCAAACCAACATTGACCC 86663 Query 6371 CAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACT 6430 ||| |||| |||| ||| | ||||| | || | || ||||||| ||||| || Sbjct 86662 CAAGGACGACCGCTGGATCATCAACGGTGCCCACGATGCTCCCAAGCTCCAGGATCACCT 86603 Query 6431 TGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || ||||| || |||||| || || || | ||| | ||||| |||||||| Sbjct 86602 CGATGGCTTCATCAACAAGTTCGTTCTCTGCAAAAAGTGCAAGAACCCTGAGACCGA 86546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940725679966