Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq700 190 2e-43
>seq700
Length=246488
Score = 190 bits (210), Expect = 2e-43
Identities = 381/561 (68%), Gaps = 9/561 (2%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| ||||||||||| || | ||| ||||| || || || | ||| || ||| || |
Sbjct 27991 GCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAG 27932
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||||||||| || || |||||||| ||| || ||
Sbjct 27931 ACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAA 27872
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268
||||| || || || ||||| || |||| ||| | |||||| | || || ||
Sbjct 27871 GATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAG---GAAGAGTTCTTGTC 27815
Query 93269 CTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
||| |||||| | ||||||||| || || || || ||||| | || || | ||
Sbjct 27814 CTGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGC 27755
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
||| || |||||| || || | | || ||||| || || || | |||||| ||
Sbjct 27754 GTTGAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTA 27695
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
|||| || |||| |||||||| || ||||| |||||||| |||| ||| || |
Sbjct 27694 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCAGG 27635
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
|||||| || || |||| ||| || || || || ||||| ||||||||||| ||
Sbjct 27634 GATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGC 27575
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCAT---CATCTTTAAGCTTATC 93564
||||| ||||| | || || || || | | ||| | || | | | || |
Sbjct 27574 GGCAAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTT 27515
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| || ||||| || |||||||||| || ||| | ||||| || || || || ||
Sbjct 27514 CCAGTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCGGC 27455
Query 93625 TTTTTTGTACATATCCCATAT 93645
|| |||||||| | ||| ||
Sbjct 27454 CTTCTTGTACATTTGCCAGAT 27434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556849760234640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |