Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq700 127 4e-24
seq839 114 3e-20
seq765 96.9 7e-15
>seq700
Length=246488
Score = 127 bits (140), Expect = 4e-24
Identities = 312/471 (66%), Gaps = 14/471 (3%)
Strand=Plus/Minus
Query 251542 TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCC 251601
|| || |||| ||||| ||||| || || | |||||| | |||||||| ||||
Sbjct 28278 TGGTAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCC 28219
Query 251602 ATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATG 251661
||||||||||||||||| ||||| |||||| ||| | ||| || || |||| |
Sbjct 28218 ATGAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGGGCGACGAGCAGA 28159
Query 251662 CGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGA 251721
|| || || || ||||| | ||||| ||| || | ||||||||||| | || | |
Sbjct 28158 CGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGAGCA 28099
Query 251722 CAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCC 251781
||||| | |||||| || ||| | || || ||| ||| || || | || ||
Sbjct 28098 CAAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATGTCC 28039
Query 251782 T---TCACCTG-TGCCAGAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAA 251837
| ||| ||| | | | || | || || | |||| ||||| | ||||
Sbjct 28038 TGGATCATCTGCTTGCTGGCACGTC----CCTTGAGGTGAGAGTGGAGGAGGCAGGCAAA 27983
Query 251838 CTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCAT 251897
| ||| ||||||||||| ||| ||||| |||||| || | | ||| || |||||
Sbjct 27982 GTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGGCAT 27923
Query 251898 CACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTC 251957
| ||||| ||| |||||||||| || | ||||| || ||| | | ||||||
Sbjct 27922 GAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAGATACCCTC 27863
Query 251958 GACACACACCCATGCAACAAGGCGCTCAGCAAACGA------CTTGTCCTG 252002
||| | | |||||||| |||| ||||| || |||||||||
Sbjct 27862 AACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTG 27812
>seq839
Length=23613
Score = 114 bits (126), Expect = 3e-20
Identities = 417/643 (65%), Gaps = 11/643 (2%)
Strand=Plus/Minus
Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCAC-TGTCTTCATAG 293173
||| | |||||| | |||||||||||| || ||||| | | | || |||| | ||
Sbjct 14135 CTGAGACTGATCAATAAAGGCACCACGGTCGGCAGCCATCTGCACAACCTGTCG-CTGAG 14077
Query 293174 AGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAATAACCTTCT 293233
| ||||||||| |||||||||| ||||||||||| | | | ||| | ||||
Sbjct 14076 AAATCTCCCACACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGGATGTTCT 14017
Query 293234 GGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACC-AAGTCCCACGA 293292
||||||| || | ||||| || |||||||||| | ||||||| ||| |||| |
Sbjct 14016 GGATAGAACCGTTCTCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGACCCATG- 13958
Query 293293 GCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGA 293352
| | || || || ||| | | ||||||||| ||||||| ||||| || ||
Sbjct 13957 TCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGG 13898
Query 293353 CGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGCA 293412
|| ||| ||||| || || ||| ||| ||| || |||||| |
Sbjct 13897 CGTTGGTAGATGTTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAG 13838
Query 293413 GTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACCCT---TCTTGACA 293469
||| || ||||||||| ||||| |||| ||| | | ||| | ||||||||
Sbjct 13837 GTACTGGCAGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACA 13778
Query 293470 CGCGATTCGAGACCCGCCCAGT-CCAGAGCAGTCTG-AGGTGTAACACCCCAGAGATGAT 293527
| | ||| |||| | ||| || ||| | ||| | ||| ||| | | |
Sbjct 13777 TCCTCTCGGAGGGATTCCCACTCCCAAAG--GTCAGAAGGCTTGACATTCCACATGTCAA 13720
Query 293528 ACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCAT 293587
|||| | ||||||| ||||||||| |||| ||||||| | ||| || | ||| |
Sbjct 13719 ACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCT 13660
Query 293588 CAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGGT 293647
| ||||| ||| | || ||||| ||| ||| ||||||||| | ||
Sbjct 13659 TGGCGAGCTGTACAGAAGTGGTAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGT 13600
Query 293648 TGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTGCA 293707
| |||| ||||||| ||| ||||| ||||| || | ||| |||| |
Sbjct 13599 TCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAA 13540
Query 293708 GACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCT 293750
|||| || ||||| | ||||| ||| || ||||| |||||||
Sbjct 13539 GACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCT 13497
>seq765
Length=31563
Score = 96.9 bits (106), Expect = 7e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||| || ||||| ||||| ||||| || |||| |||||||| || |||
Sbjct 16334 GGCGAGGATCTCTGCAACTGTACCTTCTCTCTCGCCTACGGTGCCAAGATTCTTCTTAAC 16393
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| |||||||||| | || || ||||| ||||||||| || |
Sbjct 16394 CAGACTCACCTCCGTCTCAAGCGTGGTCAGCGTTACGGTCTTTGCGGTCCCAACGGTTCT 16453
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||| || ||||||||||| |||| ||| | | ||| ||||| | |||
Sbjct 16454 GGAAAGTCCACCCTCATGCGCGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 16512
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
||||| | ||| || | || ||||||||| | |||||
Sbjct 16513 GGACGAGGTCAAGACTGTCTTCGTTGAGCACGACTTGGACTC 16554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027815913713826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |