Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq391 188 1e-42
seq1088 167 4e-36
seq1221 134 3e-26
seq700 122 2e-22
seq765 98.7 2e-15
>seq391
Length=65998
Score = 188 bits (208), Expect = 1e-42
Identities = 178/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| || || | |||| ||| || |||||||| || |||||||| || ||||||
Sbjct 44446 CCACCGCGGAGACGGAGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 44505
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| |||||||| || | || || ||||| || |||
Sbjct 44506 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 44565
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | |||||| |||||||| || | || || ||
Sbjct 44566 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGACC 44625
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || |||||||||||||||||||| |||||
Sbjct 44626 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAATATTTGCAT 44672
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||||||||| | || | || || || || || || || ||||| || || ||
Sbjct 44674 CCACCGCGAAGGCGGAGGACGAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCAGAC 44733
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||| || || | |||||| |||||||| || | || || ||||| || |||
Sbjct 44734 AGGGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGA 44793
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | |||||| |||||||| || | || || ||
Sbjct 44794 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCGACC 44853
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || |||||||||||||| || || |||||
Sbjct 44854 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 44900
>seq1088
Length=144876
Score = 167 bits (184), Expect = 4e-36
Identities = 176/232 (76%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| ||| || |||||||| || |||||||| || |||
Sbjct 60711 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 60652
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || |||| || ||||| || |||
Sbjct 60651 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGA 60592
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| || |||||||| | || || ||
Sbjct 60591 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 60532
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGC 68466
|| | |||||| || || ||||| |||||||||||||| |||||||| ||||
Sbjct 60531 TCAAGGGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATGATGC 60480
>seq1221
Length=114529
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || |||||||| || | ||||| || | |||||| || ||||| ||
Sbjct 56450 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 56391
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || || ||||| || || ||||| |||||||| || ||||| | |||||| |||
Sbjct 56390 AATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 56331
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| | || || || || | ||||||||| || ||||| |||||||| |||||
Sbjct 56330 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 56272
>seq700
Length=246488
Score = 122 bits (134), Expect = 2e-22
Identities = 558/866 (64%), Gaps = 33/866 (4%)
Strand=Plus/Minus
Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998
|| || ||||||||||| || | || || |||||| ||||||| |||||| | ||
Sbjct 28290 ACACCAGCCTTCTGGTAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGA 28231
Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058
|| ||| |||||||||||| |||||||| ||| || ||| || |||||
Sbjct 28230 GAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGG 28171
Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118
|| || | || ||||| ||||||||||||||||| |||| |||| ||||||||||
Sbjct 28170 GCGACGAGCAGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATG 28111
Query 10119 CCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCC 10178
|| | || || |||| || || | ||| | || || ||| || || ||
Sbjct 28110 CCTAGCAGAGCACAAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCG 28051
Query 10179 TCGACGATGCTCTTTACCA----CGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAG 10234
|| |||| || | || | | || || | || ||| | || | ||
Sbjct 28050 GTGATGATGTCCTGGATCATCTGCTTGCTGGCACGTC----CCTTGAGGTGAGAGTGGAG 27995
Query 10235 GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACC 10294
||| |||| | ||| || |||||||| || ||||| |||||| || |||
Sbjct 27994 GAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGT 27935
Query 10295 CAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGG-CGCAGAACGACCCGGAGA 10353
||||||||||||||| || || || ||||||||||||| ||| || | ||| ||
Sbjct 27934 CAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCA-AAGGCACCGCTGA 27876
Query 10354 ACAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCTCTGCGAAGG-AGCGGTCGCG 10411
| | | |||||| || ||| | |||| || || |||| || |||| || | || |
Sbjct 27875 AGAAGATACCCTCAACAGCA-GCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTG 27817
Query 10412 CGAAAAGTATTTCGA--GGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATA 10469
| |||| ||||| | |||||||||| | | ||| || || || |
Sbjct 27816 TCCTGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACG 27757
Query 10470 GCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAG 10529
|| | |||||| | | | || | |||| || | |||| |||||| |||
Sbjct 27756 GCGTTGAAGAGGTAAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAG 27697
Query 10530 TATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGTGCC-G 10587
||| ||| ||||| | |||| | |||| || ||||||| ||| || |||
Sbjct 27696 TATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAT-CGAGCCTC 27638
Query 10588 AGGGGTCCGTGACTTCCTCG--GCAAAGTTGTTGTTC-AGGTTCTCCATCACCATGCCAT 10644
|||| || ||| ||||| || | | | | | |||||||| | || || ||||
Sbjct 27637 AGGGATC--TGA--ACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCAT 27582
Query 10645 CGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATC-GTT---C 10700
|| | | |||||||| | || ||||| |||||||| |||| || | ||| |
Sbjct 27581 CGGAGGCGGCAAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGAC 27522
Query 10701 AGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAA 10760
||| || |||||| | ||||| | || | || |||||| | ||||||||
Sbjct 27521 GGTTGTT----CCAGTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAG 27466
Query 10761 GTGGCAACGGCCTTCTTGTACATCTG 10786
| || |||||||||||||||| ||
Sbjct 27465 GAAGCCTCGGCCTTCTTGTACATTTG 27440
>seq765
Length=31563
Score = 98.7 bits (108), Expect = 2e-15
Identities = 437/676 (65%), Gaps = 37/676 (5%)
Strand=Plus/Minus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | || ||| |||| || ||||| || || || ||||||
Sbjct 17343 CGCCACTGGATGTACTCGGAAGGAGTCTTGTCGAGATGGTTATCGATGTGAGCGAAAGCG 17284
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGT-CGG 225099
||||| | ||| || || || ||||| |||| | | ||| | || ||
Sbjct 17283 TGCTGCTTAATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTGGGTAGGG 17224
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| || |||||||| ||||| || |||| |||||| ||||| ||||| |||||
Sbjct 17223 ATGAG-CTCACCAGTGAGGACGTTGATCAGAGTAGACTTGCCAGCACCGTTGGGACCAAT 17165
Query 225160 CACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGC- 225218
||| |||| || || || | ||| || | || ||| ||||| ||||
Sbjct 17164 AACGGCAATACGAGAGCCCAGAGAGCACTGGAAGGAGATGTCGCT---GATCT-GGGGCT 17109
Query 225219 --CAGTT----TGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGT 225266
|| | |||| |||| || | |||| || ||||| |
Sbjct 17108 TGGAGGTACCGGGGTATTGGAAGGACATATGGGTGGCACGGAG------AATGGCCTTGG 17055
Query 225267 CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGT 225326
|||||| | | |||||| ||||| |||||||||||||| ||| | || | | |
Sbjct 17054 CCTTGGTCTTGACACCCTCAAGGAAACCGGGCTCGGGGAAGCTGAACTCGATCTCAGACT 16995
Query 225327 CCTTCAGGTCGTAGTAAGATGCAGC-CTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTT 225385
| || |||||||| || || |||| || || |||||||||| ||||||
Sbjct 16994 CACCAAGCTCGTAGTAGGACTTGGCGGAGGGGTTGC-GGGCGACGAAAGCAGCCAGGTTA 16936
Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC 225444
|| || | ||||||||| || |||||| ||||| || ||| | ||| ||
Sbjct 16935 CCCTTGTAACGCTTGAGCTTGA--ATC-GCTCGTAGTGAACGATGTGCTG-GCAGACGTT 16880
Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACG-ACACGTTCGTCAGGCCCTTGA 225503
||| ||||| ||||||||||| || || ||||| || | || | || | |||||
Sbjct 16879 GTCGAGGAAACCAGAGTCGTGAGAGACGATGATAGAAGTGCAAG--CG--GAGTTCTTGA 16824
Query 225504 GGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAA 225563
||| | |||||| ||||| | || |||| ||||| ||||| ||||| || |
Sbjct 16823 GGTACTCCTCGAGCCACTTAACGTTCTTCACATCCAAATGGTTGGTAGGCTCGTCGAGCA 16764
Query 225564 GCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCC 225623
||| || || | | | || || || || | || |||||||| ||||| || |
Sbjct 16763 ACAGAATATCGGGAGCCTCGAAGACAGCACGGCACAAAGCAAGCTTCATCTTCCAACCAC 16704
Query 225624 CGGACAGGGAGCCGAT 225639
| || |||| || |||
Sbjct 16703 CAGAGAGGGCGCTGAT 16688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921604128835920
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