Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1088 109 5e-19 seq391 89.7 4e-13 >seq1088 Length=144876 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||||||| || || ||| || || || |||||| Sbjct 60681 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 60622 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || ||||| |||||||| |||||||| || ||||| ||||| || Sbjct 60621 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 60562 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||||| || || || || | ||| | ||| || || || || || Sbjct 60561 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTAAGGGTC 60502 Query 114366 TTTACAAAAATCTGCATG 114383 || || |||||||||||| Sbjct 60501 TTGACGAAAATCTGCATG 60484 >seq391 Length=65998 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || | ||| | || ||||| || ||||||||||| || Sbjct 44671 ATACCACCGCGAAGGCGGAGGACGAGATGAAGGGTTGATTCCTTCTGAATGTTGTAGTCA 44730 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || || ||||| || || || ||| | || | ||||| ||||| ||| Sbjct 44731 GACAGGGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGA 44790 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | || | ||| || | || ||| Sbjct 44791 GGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCG 44850 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || || | ||| | || |||||||| || || || ||||| || ||||||| Sbjct 44851 ACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCATGG 44902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420126279064632