Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq839 349 7e-91
seq700 318 1e-81
>seq839
Length=23613
Score = 349 bits (386), Expect = 7e-91
Identities = 886/1343 (66%), Gaps = 41/1343 (3%)
Strand=Plus/Minus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || || ||||| ||||||| |||| | | ||
Sbjct 13931 GTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTATAGGG 13872
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
||||| || ||| ||||||| || ||||||| || || ||||| ||||| || | ||
Sbjct 13871 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTAGGCATAGGAGCAAC 13812
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
||||||||||| | | ||||| ||| || || ||| | ||| |||||
Sbjct 13811 GAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGATTCCCACTCCCA 13752
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
| | | || ||| |||| ||||||||||||||| || | ||||
Sbjct 13751 AAGGTCAGA-AGGC--------TTGACATTCCACATGTCAAACTGGAGAATACCCTCAGA 13701
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT-TACAGCTCT 244388
| | || ||||| | |||| | ||||||||| || || ||| |||| ||||| |
Sbjct 13700 GGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGTACAGAAGT 13641
Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448
|| ||||| |||| |||||||||||||||||| |||||||| || || |||| |
Sbjct 13640 GGTA-AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGG 13582
Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508
| ||||| |||| | | |||| | || || || || || || || | |
Sbjct 13581 GAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGAACACCAAGAC 13522
Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568
| ||||||| ||| ||| ||||| | || || | || ||||| ||| |||
Sbjct 13521 CAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGGACAGGGTAGTGGTTCACGT 13462
Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|||| | |||||| ||||||||| | | | ||| ||| |||| || ||||
Sbjct 13461 CGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAGT 13402
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGC---GAC-- 244683
|||| | | ||| ||| | || ||| || |||||| |||
Sbjct 13401 CGTAGACA---GCATCTTCGTAGTTGATGA--------AA------GAGGGCAGAGACAA 13359
Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
| ||| |||||||| || || ||||| || | | ||||| | |||||| |||||
Sbjct 13358 GGAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCA 13299
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
||||| || |||||| || |||| || || ||| |||| ||||||| ||
Sbjct 13298 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 13239
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
||||||||||||||| || || ||||| |||||| |||| | | | ||| ||
Sbjct 13238 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAG 13179
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923
| | |||||||| | | ||||| |||| |||||| |||||| |||||| ||
Sbjct 13178 CTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGC 13119
Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983
||||||||| || || || | || || |||||| |||||||| ||| |
Sbjct 13118 CTCGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGT 13059
Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043
||| ||||| | || ||| | || ||||||||| || |||||||| |||||| ||||
Sbjct 13058 CCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAGGAA 12999
Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103
||||| | | | ||| ||| || |||||| | || || | || || ||
Sbjct 12998 CAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAA 12939
Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163
||| ||| ||||||||||||| | ||||| ||||| ||| || || ||||||||||| ||
Sbjct 12938 GACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTTGCCACC 12879
Query 245164 CTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219
|||||| | | | ||||| |||||| | ||||| | || || | ||||
Sbjct 12878 CTGGTCGA----CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACCGT 12823
Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACA 245279
|||| || ||||| || ||||| | ||| || | | || | || | ||
Sbjct 12822 TAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTTCA 12763
Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339
||| | || || || |||||| || | ||| || |||||| ||| || || |
Sbjct 12762 AGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATAC 12703
Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399
| || ||||||||| |||||| | | || ||||| ||||||||||| |||| |||
Sbjct 12702 CGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGG 12643
Query 245400 TGCACGAGTTGAACAGAGTGGGG 245422
| | | |||||| || ||||||
Sbjct 12642 TACCAGCGTTGAATAGTGTGGGG 12620
>seq700
Length=246488
Score = 318 bits (352), Expect = 1e-81
Identities = 599/860 (70%), Gaps = 28/860 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| ||||||||||| || ||
Sbjct 27434 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 27493
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415
||||||| | |||| | || |||| | | |||| ||| ||| ||
Sbjct 27494 TCCAAGGATCTCCATGACTGGAACA-ACCGTCTAACTGCGGACGAGCAGTACTTCATCTC 27552
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || || ||||| |||||||| || || || ||||| |||||||| | |
Sbjct 27553 CCACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAACCTTGTTGAGCG 27612
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||| ||| | |||||| || ||||||||||| |||||||| ||
Sbjct 27613 ATTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 27672
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| || ||| | ||||||| |||| |||||| ||| ||
Sbjct 27673 GGAGAACATCCACTCCGAAACATACTCT---CTGCTCATTGACACCTACATCAAGGAGCC 27729
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| || | | || ||||| ||| | || || || || |||||| ||||||||
Sbjct 27730 TGCTCAGAGAACTTACCTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGC 27789
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAG 42711
|| ||||| | |||||| || | | || | | | || | | || | || || |
Sbjct 27790 TGATTGGGCTATTCGATGGATCCAG-GACAAGAACTCTTCCTTTGCCCAGCGTCTTGTTG 27848
Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771
||||| | || || ||||| ||||||||| || ||||| || ||||| ||||||||||
Sbjct 27849 CCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCTGGCTCA 27908
Query 42772 AGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830
|| || ||| || |||||||| || || ||||| ||||| |||||| | ||||||
Sbjct 27909 AGAAGCGTGGTCTC-ATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAG 27967
Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTC 42889
|| || || | ||||||||||||||||| ||| |||||| ||| || ||| |
Sbjct 27968 GGTCTTCACACCGACTTTGCCTGCCTCCTCCACTC---TCACCTCAAGGGACGTGCCAGC 28024
Query 42890 GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949
||| || | ||| || ||||||||| || ||||| || ||| || ||||||||||
Sbjct 28025 -AAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGAAGTTCCTCAC 28083
Query 42950 GCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008
|| | || ||| ||| | ||| | ||||||||| |||||||| ||||||||
Sbjct 28084 TGAGGCTCT-CCCTTGTGCTCTGCTAGGCATGAACTCGAACCTCATGAAGCAGTACATCG 28142
Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065
||| |||||| || | ||| || || ||| | || | || | | ||||| |
Sbjct 28143 AGTTCGTCGCTGATCGTCTGCTCGTCGCC--CTCGGCAACGAGAAG-GTGTACAAGGCCA 28199
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||||||||| |||||||||||||| | | ||||||||||||||||||||||
Sbjct 28200 CCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTTTTCGAGA 28259
Query 43126 AGCGCGTCGCCGACTACCAG 43145
|||| || || |||||||||
Sbjct 28260 AGCGTGTTGCTGACTACCAG 28279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944320478475360
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