Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq839 349 7e-91 seq700 318 1e-81 >seq839 Length=23613 Score = 349 bits (386), Expect = 7e-91 Identities = 886/1343 (66%), Gaps = 41/1343 (3%) Strand=Plus/Minus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || ||||| ||||||| |||| | | || Sbjct 13931 GTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTATAGGG 13872 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| ||||||| || ||||||| || || ||||| ||||| || | || Sbjct 13871 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTAGGCATAGGAGCAAC 13812 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 ||||||||||| | | ||||| ||| || || ||| | ||| ||||| Sbjct 13811 GAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGGGATTCCCACTCCCA 13752 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | | | || ||| |||| ||||||||||||||| || | |||| Sbjct 13751 AAGGTCAGA-AGGC--------TTGACATTCCACATGTCAAACTGGAGAATACCCTCAGA 13701 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCT-TACAGCTCT 244388 | | || ||||| | |||| | ||||||||| || || ||| |||| ||||| | Sbjct 13700 GGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGTACAGAAGT 13641 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 || ||||| |||| |||||||||||||||||| |||||||| || || |||| | Sbjct 13640 GGTA-AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGG 13582 Query 244449 CGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGC 244508 | ||||| |||| | | |||| | || || || || || || || | | Sbjct 13581 GAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGAACACCAAGAC 13522 Query 244509 CGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGT 244568 | ||||||| ||| ||| ||||| | || || | || ||||| ||| ||| Sbjct 13521 CAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGGACAGGGTAGTGGTTCACGT 13462 Query 244569 CGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 |||| | |||||| ||||||||| | | | ||| ||| |||| || |||| Sbjct 13461 CGATAATCTTGTTCAGGTTGCGGACAACGACTTGAGTGACCTCGTGCAGCTTCTTGAAGT 13402 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGC---GAC-- 244683 |||| | | ||| ||| | || ||| || |||||| ||| Sbjct 13401 CGTAGACA---GCATCTTCGTAGTTGATGA--------AA------GAGGGCAGAGACAA 13359 Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 | ||| |||||||| || || ||||| || | | ||||| | |||||| ||||| Sbjct 13358 GGAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCA 13299 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 ||||| || |||||| || |||| || || ||| |||| ||||||| || Sbjct 13298 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 13239 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 ||||||||||||||| || || ||||| |||||| |||| | | | ||| || Sbjct 13238 CTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAG 13179 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 | | |||||||| | | ||||| |||| |||||| |||||| |||||| || Sbjct 13178 CTTCTGAGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGC 13119 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 ||||||||| || || || | || || |||||| |||||||| ||| | Sbjct 13118 CTCGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGT 13059 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| ||||| | || ||| | || ||||||||| || |||||||| |||||| |||| Sbjct 13058 CCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAGGAA 12999 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAA 245103 ||||| | | | ||| ||| || |||||| | || || | || || || Sbjct 12998 CAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAA 12939 Query 245104 GACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCC 245163 ||| ||| ||||||||||||| | ||||| ||||| ||| || || ||||||||||| || Sbjct 12938 GACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTTGTTGCCACC 12879 Query 245164 CTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219 |||||| | | | ||||| |||||| | ||||| | || || | |||| Sbjct 12878 CTGGTCGA----CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACCGT 12823 Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACA 245279 |||| || ||||| || ||||| | ||| || | | || | || | || Sbjct 12822 TAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTTCA 12763 Query 245280 TGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 ||| | || || || |||||| || | ||| || |||||| ||| || || | Sbjct 12762 AGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATAC 12703 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 | || ||||||||| |||||| | | || ||||| ||||||||||| |||| ||| Sbjct 12702 CGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGG 12643 Query 245400 TGCACGAGTTGAACAGAGTGGGG 245422 | | | |||||| || |||||| Sbjct 12642 TACCAGCGTTGAATAGTGTGGGG 12620 >seq700 Length=246488 Score = 318 bits (352), Expect = 1e-81 Identities = 599/860 (70%), Gaps = 28/860 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| ||||||||||| || || Sbjct 27434 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 27493 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAA 42415 ||||||| | |||| | || |||| | | |||| ||| ||| || Sbjct 27494 TCCAAGGATCTCCATGACTGGAACA-ACCGTCTAACTGCGGACGAGCAGTACTTCATCTC 27552 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || ||||| |||||||| || || || ||||| |||||||| | | Sbjct 27553 CCACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATTGTCAACGAGAACCTTGTTGAGCG 27612 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | |||||| || ||||||||||| |||||||| || Sbjct 27613 ATTCAGCGGCGAGGTTCAGATCCCTGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 27672 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||| | ||||| || ||| | ||||||| |||| |||||| ||| || Sbjct 27673 GGAGAACATCCACTCCGAAACATACTCT---CTGCTCATTGACACCTACATCAAGGAGCC 27729 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | || | | || ||||| ||| | || || || || |||||| |||||||| Sbjct 27730 TGCTCAGAGAACTTACCTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGC 27789 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAG 42711 || ||||| | |||||| || | | || | | | || | | || | || || | Sbjct 27790 TGATTGGGCTATTCGATGGATCCAG-GACAAGAACTCTTCCTTTGCCCAGCGTCTTGTTG 27848 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771 ||||| | || || ||||| ||||||||| || ||||| || ||||| |||||||||| Sbjct 27849 CCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCTTCCATTTTCTGGCTCA 27908 Query 42772 AGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || || ||| || |||||||| || || ||||| ||||| |||||| | |||||| Sbjct 27909 AGAAGCGTGGTCTC-ATGCCCGGTCTGACTTTCTCTAACGAGCTCATCTCTCGTGACGAG 27967 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTC 42889 || || || | ||||||||||||||||| ||| |||||| ||| || ||| | Sbjct 27968 GGTCTTCACACCGACTTTGCCTGCCTCCTCCACTC---TCACCTCAAGGGACGTGCCAGC 28024 Query 42890 GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 ||| || | ||| || ||||||||| || ||||| || ||| || |||||||||| Sbjct 28025 -AAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGAAGTTCCTCAC 28083 Query 42950 GCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 || | || ||| ||| | ||| | ||||||||| |||||||| |||||||| Sbjct 28084 TGAGGCTCT-CCCTTGTGCTCTGCTAGGCATGAACTCGAACCTCATGAAGCAGTACATCG 28142 Query 43009 AGTACGTCGCCGACCATCTCCT-GT-GCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065 ||| |||||| || | ||| || || ||| | || | || | | ||||| | Sbjct 28143 AGTTCGTCGCTGATCGTCTGCTCGTCGCC--CTCGGCAACGAGAAG-GTGTACAAGGCCA 28199 Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125 | |||||||||||| |||||||||||||| | | |||||||||||||||||||||| Sbjct 28200 CCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGTGGCAAGACCAACTTTTTCGAGA 28259 Query 43126 AGCGCGTCGCCGACTACCAG 43145 |||| || || ||||||||| Sbjct 28260 AGCGTGTTGCTGACTACCAG 28279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944320478475360