Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq391 118 3e-21 seq1088 107 5e-18 >seq391 Length=65998 Score = 118 bits (130), Expect = 3e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||||||||| | || || || |||| ||| || || ||||| || |||||| Sbjct 44443 TGACCACCGCGGAGACGGAGGACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCG 44502 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||| ||||| || ||||| | || || || ||||| |||| ||||| || | Sbjct 44503 GAGAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGA 44562 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || || | || || || || || | ||| || || Sbjct 44563 GGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCG 44622 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || |||||||||||||| ||||| Sbjct 44623 ACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAATATTTGCAT 44672 >seq1088 Length=144876 Score = 107 bits (118), Expect = 5e-18 Identities = 165/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 60711 CCACCACGGAGGCGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 60652 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || || ||| Sbjct 60651 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGG---TCCGGG 60595 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || | || ||||| || || | ||| || || Sbjct 60594 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCC 60535 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || || |||||||||||||| || || ||||||||||| |||||||| ||| Sbjct 60534 ACCTCAAGGGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCATGATG 60481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179630428685308