Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq700 105 1e-17 >seq700 Length=246488 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||||| | |||||| ||||||||||| ||||| || || || | || || Sbjct 28109 GGCATGAACTCGAACCTCATGAAGCAGTACATCGAGTTCGTCGCTGATCGTCTGCTCGTC 28168 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || || || | ||||| |||||||| ||| |||||||| | ||| |||||| ||| Sbjct 28169 GCCCTCGGCAACGAGAAGGTGTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATC 28228 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 || ||| || || || ||||| ||||| |||||||| Sbjct 28229 TCTCTTGGTGGCAAGACCAACTTTTTCGAGAAGCGTGT 28266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102857588789100