Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq839 176 5e-39 seq700 154 2e-32 >seq839 Length=23613 Score = 176 bits (194), Expect = 5e-39 Identities = 1071/1701 (63%), Gaps = 53/1701 (3%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 14245 GCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGC 14186 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || || | |||| | ||| || | |||| | ||| | | || || ||| Sbjct 14185 ATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 14126 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTCC 113764 || || ||| ||||| || || ||||| | |||| ||| || || ||| Sbjct 14125 TCAATAAAGGCACCACGGTCGGCAGCCATCT---GCACAACCTGTCGCTGAGAAATCTCC 14069 Query 113765 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAG 113824 |||||||| |||| || ||| | ||| | ||||| | ||| || ||||| || Sbjct 14068 CACACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGA- 14010 Query 113825 CCACCCGCCTTGACCATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 113881 ||| || | |||| | | ||||||| | | ||||| ||||| || | Sbjct 14009 --ACCGTTCTCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 13952 Query 113882 AGATCCTCCACGAGATGC---TTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTC 113938 ||||||| |||| || |||||||| ||||| || || ||| || | Sbjct 13951 AGATCCT---TGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAGGACTCGGCGT 13895 Query 113939 AGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTG 113998 | ||||| |||| || || ||||| |||||||| ||||| || | || || | ||| Sbjct 13894 TGGTAGATGTTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTA 13835 Query 113999 GAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGT 114058 ||| || ||||| || || | ||| || ||||| |||| ||| | | | | Sbjct 13834 CTGGCAGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATCC 13775 Query 114059 TCCTTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACT 114116 || ||||| ||||| | | || | || | || | | |||||| ||||||| Sbjct 13774 TCTCGGAGGGATTCCCACTCCCAAAGGTCAG--AAGGCTTGACATTCCACATGTCAAACT 13717 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 |||| ||||| | ||||| || || |||| || || ||| || ||||| ||| | Sbjct 13716 GGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGG 13657 Query 114177 C---CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 114233 | | | | || | | ||||| ||||| || || ||||| || || | | Sbjct 13656 CGAGCTGTACAGAAGTGG---TAAGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGT 13600 Query 114234 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 114293 ||| | |||||| || ||||| | | ||| || || |||| || | Sbjct 13599 TCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAA 13540 Query 114294 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA 114353 ||||||| ||||| || ||||| || || || | ||| || || ||||| | | Sbjct 13539 GACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGGA 13480 Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTT-TGTGA 114410 | || || ||| ||||||| | | || || ||| |||||| ||| |||| Sbjct 13479 CAGGGTAGTGGTTCACGTCGATAATCTTGTTCAG---GTTGCGGACAACGACTTGAGTGA 13423 Query 114411 TTTCATGAAGCTTTTCGTAATC-AAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG 114469 || || ||||| | | | || | || || | || | |||| | || || Sbjct 13422 CCTCGTGCAGCTTCTTGAAGTCGTAGACAGC-ATCTTCGTAGTTGATGAAAGAGGGCAGA 13364 Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 | | || || || || || |||| | |||||| | | |||||| ||||| || Sbjct 13363 GACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCA 13304 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || |||| || || || ||||| || | ||||||||| || ||| ||| || Sbjct 13303 GTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAG 13244 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||| |||||| | || | || ||||| || |||| || |||||| || | | Sbjct 13243 TGATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATAC 13184 Query 114650 CAGA-CATCGGCGGC-TGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 114707 || | | || | | | || | | | ||| | ||||| ||||||||| || Sbjct 13183 CAAAGCTTCTGAGCCTTGATAGACTTGCG--ACCCTTACCCTCTCTCTCGTACTTCTCGT 13126 Query 114708 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 114767 | || || || ||||| ||||| | || | || || || || | ||||| | Sbjct 13125 ACAGAGCCTCGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACA 13066 Query 114768 AGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAG 114827 |||| ||||| ||| || ||| ||||||||||||||||| || |||||||| || | Sbjct 13065 TAAGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGG 13006 Query 114828 CTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 114887 | ||| || || ||| ||| | || || | || || || || | || | | Sbjct 13005 CCAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGA 12946 Query 114888 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG-- 114945 | || | || ||| |||||||| || || ||||| | |||| | || | | || Sbjct 12945 ACTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACC---AGGTCGCT 12889 Query 114946 ----ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 ||| |||||| || || | || ||| || || || || ||||| |||| || Sbjct 12888 TGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGA 12829 Query 115002 TACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGA 115061 ||| | ||| ||||| ||||| ||| ||| |||| | || |||| Sbjct 12828 CACCGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGA 12769 Query 115062 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGT 115121 || || |||||||| || ||| ||| || || || || | |||| | ||| Sbjct 12768 CGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGT 12709 Query 115122 AGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCC 115181 |||| |||||||| ||| |||| | | | ||||||||| |||| || ||| Sbjct 12708 AGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCT 12649 Query 115182 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACAT 115239 || |||||||||||||| || || || | || || ||| | | |||| ||||| Sbjct 12648 GAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGA--AGAACTTGCTAGACAT 12591 Query 115240 CTTATCGTAGGTCTCCAAGAC 115260 | ||| ||||||||||| Sbjct 12590 GAGGTTGTATGTCTCCAAGAC 12570 >seq700 Length=246488 Score = 154 bits (170), Expect = 2e-32 Identities = 538/823 (65%), Gaps = 35/823 (4%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 |||||| |||| ||||||||||| ||||| ||||| || ||||| ||| ||||||| Sbjct 28276 GTAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCA-CCAAGAGAGATGTTCTCCA 28218 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAG 125871 | || || || ||||| | | || | | | |||| || | ||| Sbjct 28217 TGAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTG-----CCGAGGGCGACGAG 28163 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 |||||||| | |||| |||| ||||||| ||| | |||||||| || | || Sbjct 28162 CAGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAG 28103 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 ||| ||||| || || || |||| || |||||| ||||| || | ||| Sbjct 28102 AGCACAAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGAT 28043 Query 125992 GGCGTGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGC 126048 | | || || | | | | || ||| ||| | || | || ||| || ||| Sbjct 28042 GTCCTGGATCATCTGCTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGG--CA-GGC 27986 Query 126049 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108 ||| || ||| |||||||||||||| |||||||| || || ||||| ||| || || Sbjct 27985 AAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGG 27926 Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168 ||||||||| |||||||| | ||||||||| | | ||| | ||| ||||||||| || Sbjct 27925 CATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAGATACC 27866 Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAA 126225 ||| ||| || || |||| ||||||| |||||||| || || |||| | Sbjct 27865 CTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGA---AGAGTTCTTGTCCTGGAT 27809 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 ||| || ||||| | ||||| || ||| || || | ||| | | || | || Sbjct 27808 CCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAA 27749 Query 126286 GAGTTCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 126343 ||| | || ||||| || || |||||||| | || ||||| || |||||| Sbjct 27748 GAGGT--AAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTT 27691 Query 126344 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 126402 ||| ||||| | | ||| || | ||| | ||||||| | || || || || Sbjct 27690 TCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGAT 27632 Query 126403 CTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 126461 ||| ||||| | || ||| | | | | ||||| ||||| |||||||| | | Sbjct 27631 CTGAACCTC-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGG 27573 Query 126462 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTC-GTT--CAGGGTCTTCC 126518 |||| || || || || | ||||| | ||| || | | | ||| || | |||| Sbjct 27572 CAAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCC 27513 Query 126519 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| | |||||||| || ||||| | |||||| || ||||| Sbjct 27512 AGTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 27470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597341757464880