Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq839 230 2e-55
>seq839
Length=23613
Score = 230 bits (254), Expect = 2e-55
Identities = 956/1493 (64%), Gaps = 44/1493 (3%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATG 93954
|||| || || |||||||| || ||||| ||| ||| |||| || || ||||| | ||
Sbjct 12619 CCCCCACACTATTCAACGCTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTG 12678
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| | |||| ||| |||| ||| || | ||| | ||||||| ||||| | ||
Sbjct 12679 AT-ATGAAGGAGGACAGCATCGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATT 12737
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || || || || || || | | |||||| | ||||||| || || |||
Sbjct 12738 TCCAAGATGGCTGGTGGTATTGGCTTGAACGTCCACCGAATCCGTGCCACCGGCTCTTAC 12797
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
|| ||| |||||||| || || ||||| |||| || ||||| || || |||||||||
Sbjct 12798 ATTGCCGGGACCAATGGTACTTCTAACGGTGTCGTTCCCATGCTGCGTGTGTTCAACAAC 12857
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || || ||||| ||||||||||| | | | ||| | ||||| |||| |||
Sbjct 12858 ACTGCTCGTTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTC 12917
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
|||||||||||||| || || | ||| | || || |||||||||||||| || ||
Sbjct 12918 GAGCCCTGGCACGCCGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAG 12977
Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314
|| | || | ||||| ||| || || ||| | || || || || ||||| ||
Sbjct 12978 GAGGTCCGCGCTCGTGACCTGTTCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGT 13037
Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374
|||||||| || || |||| |||| | || ||||| || || || || || | |||
Sbjct 13038 GTCGAGAAGAATGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGAC 13097
Query 94375 GTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| || | | || || || |||| | ||||| |||| |||| |
Sbjct 13098 TGCTACGG-TGATGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTCG 13156
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| ||| | ||| |||||| ||| || || | || | ||| ||||| ||
Sbjct 13157 CAAGTCTATCAAGGCTCAGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGG 13216
Query 94494 TACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| || | ||| | | |||||| | ||| |||| |||| |||||| || |||| |
Sbjct 13217 AAACCCTTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTG 13275
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||| ||||| || |||||||| |||||| | ||||| |||| || |||
Sbjct 13276 GTACCATCCGAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCTCCTGATGAGG 13335
Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTC-----GTGCG-AGATGCCT 94666
| ||||| || ||||| | |||| | ||| || ||||| | || ||||||
Sbjct 13336 TCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTACGAAGATGC-- 13393
Query 94667 ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT 94726
|||||| |||| | ||| | ||| | | ||| | |||
Sbjct 13394 ---TGTCTACGACTTC-AAGAAGCTGCACGAGGTCACTCAAGTCG---------TTGTCC 13440
Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786
|||||||||| | | |||||| |||| |||||| |||| ||||| ||| |
Sbjct 13441 GCAACCTGAACAAGATTATCGACGTGAACCACTACCCTGTCCAAGAGGCTCGCAACAGCA 13500
Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846
|| || || || ||||| || | || || || ||| | || || || | |
Sbjct 13501 ACATGCGTCACCGACCCATTGGTCTTGGTGTTCAAGGTCTTGCTGATGCCTTCCTTGCTC 13560
Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906
| || |||||| || ||| ||| || | |||| | | || ||||| | ||
Sbjct 13561 TCCGCATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCA 13620
Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACG 94966
| || ||| ||| | | || || || | |||| ||| | || || ||
Sbjct 13621 TCTACCACGCTGCCCTTACCACTTCTGTACAGCTCGCCA---AGGAGGAGGGTCCCTACT 13677
Query 94967 AATCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024
| ||| || || || || | |||| ||| | ||||| ||| | ||| |||
Sbjct 13678 CCACCTTCAAGGGCTCTCC--TGCCTCTGAGGGTATTCTCCAGTTTGACATGTGGAATGT 13735
Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084
||||| || | || | || |||||| | || || | ||||| | | |||||| |
Sbjct 13736 CAAGCCTTCTGACCTTTGGGAGTGGGAATCCCTCCGAGAGGATGTCAAGACTCACGGTAT 13795
Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144
||| ||||| || || || ||||| || ||| || ||||||| ||||||||
Sbjct 13796 CCGCAACAGTCTGCTCGTTGCTCCTATGCCTACTGCCAGTACCTCGCAGATTCTTGGCAA 13855
Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204
|||||||| ||||| |||| ||||||||| | ||| | | || || || || || ||
Sbjct 13856 CAACGAGTGCTTCGAGCCCTATACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGA 13915
Query 95205 ATTCCCCGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTG 95263
|||| || ||||| || || | || | || || | ||||| | ||| |
Sbjct 13916 GTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGAC-ATGGGTCTTTGGTCCG 13974
Query 95264 ACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319
| | ||||||| | |||| | ||||| || ||||||||||||| |
Sbjct 13975 ATGCTATGAAGAACCGTATCATTGCT----GAGAACGGTTCTATCCAGAACATCCCCAAC 14030
Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| || | || ||||||| || |||||||| ||||||||||| | |||||
Sbjct 14031 ATCCCTGCCGATGTCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCG 14083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494713392112560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |