Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq839 230 2e-55 >seq839 Length=23613 Score = 230 bits (254), Expect = 2e-55 Identities = 956/1493 (64%), Gaps = 44/1493 (3%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATG 93954 |||| || || |||||||| || ||||| ||| ||| |||| || || ||||| | || Sbjct 12619 CCCCCACACTATTCAACGCTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTG 12678 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | | |||| ||| |||| ||| || | ||| | ||||||| ||||| | || Sbjct 12679 AT-ATGAAGGAGGACAGCATCGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATT 12737 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || || || | | |||||| | ||||||| || || ||| Sbjct 12738 TCCAAGATGGCTGGTGGTATTGGCTTGAACGTCCACCGAATCCGTGCCACCGGCTCTTAC 12797 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 || ||| |||||||| || || ||||| |||| || ||||| || || ||||||||| Sbjct 12798 ATTGCCGGGACCAATGGTACTTCTAACGGTGTCGTTCCCATGCTGCGTGTGTTCAACAAC 12857 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || ||||| ||||||||||| | | | ||| | ||||| |||| ||| Sbjct 12858 ACTGCTCGTTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTCGCTATCTACCTC 12917 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 |||||||||||||| || || | ||| | || || |||||||||||||| || || Sbjct 12918 GAGCCCTGGCACGCCGATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAG 12977 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | || | ||||| ||| || || ||| | || || || || ||||| || Sbjct 12978 GAGGTCCGCGCTCGTGACCTGTTCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGT 13037 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||||| || || |||| |||| | || ||||| || || || || || | ||| Sbjct 13038 GTCGAGAAGAATGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGAC 13097 Query 94375 GTTTGTGGATCGCGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | || | | || || || |||| | ||||| |||| |||| | Sbjct 13098 TGCTACGG-TGATGAGTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTCG 13156 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| ||| | ||| |||||| ||| || || | || | ||| ||||| || Sbjct 13157 CAAGTCTATCAAGGCTCAGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGG 13216 Query 94494 TACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | || | ||| | | |||||| | ||| |||| |||| |||||| || |||| | Sbjct 13217 AAACCCTTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTG 13275 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| || |||||||| |||||| | ||||| |||| || ||| Sbjct 13276 GTACCATCCGAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCTCCTGATGAGG 13335 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTC-----GTGCG-AGATGCCT 94666 | ||||| || ||||| | |||| | ||| || ||||| | || |||||| Sbjct 13336 TCGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCCTCTTTCATCAACTACGAAGATGC-- 13393 Query 94667 ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT 94726 |||||| |||| | ||| | ||| | | ||| | ||| Sbjct 13394 ---TGTCTACGACTTC-AAGAAGCTGCACGAGGTCACTCAAGTCG---------TTGTCC 13440 Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786 |||||||||| | | |||||| |||| |||||| |||| ||||| ||| | Sbjct 13441 GCAACCTGAACAAGATTATCGACGTGAACCACTACCCTGTCCAAGAGGCTCGCAACAGCA 13500 Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846 || || || || ||||| || | || || || ||| | || || || | | Sbjct 13501 ACATGCGTCACCGACCCATTGGTCTTGGTGTTCAAGGTCTTGCTGATGCCTTCCTTGCTC 13560 Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 | || |||||| || ||| ||| || | |||| | | || ||||| | || Sbjct 13561 TCCGCATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCA 13620 Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACG 94966 | || ||| ||| | | || || || | |||| ||| | || || || Sbjct 13621 TCTACCACGCTGCCCTTACCACTTCTGTACAGCTCGCCA---AGGAGGAGGGTCCCTACT 13677 Query 94967 AATCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGT 95024 | ||| || || || || | |||| ||| | ||||| ||| | ||| ||| Sbjct 13678 CCACCTTCAAGGGCTCTCC--TGCCTCTGAGGGTATTCTCCAGTTTGACATGTGGAATGT 13735 Query 95025 GAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 ||||| || | || | || |||||| | || || | ||||| | | |||||| | Sbjct 13736 CAAGCCTTCTGACCTTTGGGAGTGGGAATCCCTCCGAGAGGATGTCAAGACTCACGGTAT 13795 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| ||||| || || || ||||| || ||| || ||||||| |||||||| Sbjct 13796 CCGCAACAGTCTGCTCGTTGCTCCTATGCCTACTGCCAGTACCTCGCAGATTCTTGGCAA 13855 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||||| ||||| |||| ||||||||| | ||| | | || || || || || || Sbjct 13856 CAACGAGTGCTTCGAGCCCTATACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGA 13915 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTG 95263 |||| || ||||| || || | || | || || | ||||| | ||| | Sbjct 13916 GTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGAC-ATGGGTCTTTGGTCCG 13974 Query 95264 ACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAA 95319 | | ||||||| | |||| | ||||| || ||||||||||||| | Sbjct 13975 ATGCTATGAAGAACCGTATCATTGCT----GAGAACGGTTCTATCCAGAACATCCCCAAC 14030 Query 95320 ATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || | || ||||||| || |||||||| ||||||||||| | ||||| Sbjct 14031 ATCCCTGCCGATGTCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCG 14083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494713392112560