Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq839 168 8e-37 seq700 159 4e-34 >seq839 Length=23613 Score = 168 bits (186), Expect = 8e-37 Identities = 1077/1707 (63%), Gaps = 63/1707 (4%) Strand=Plus/Minus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 14245 GCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGC 14186 Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668 || || | |||| | ||| || | |||| | ||| | | || || ||| Sbjct 14185 ATGCTGGTGATCTTGCCCATTGTAGGGTCCTTCATGTGAATGTTGAGAGACTGAGACTGA 14126 Query 115669 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 115725 || || ||| || || || || ||||| | |||| ||| || || ||| Sbjct 14125 TCAATAAAGGCACCACGGTCGGCAGCCATCTG---CACAACCTGTCGCTGAGAAATCTCC 14069 Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785 |||||||| |||| || ||| | ||| | ||||| | ||| || |||||||| Sbjct 14068 CACACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGA- 14010 Query 115786 CCACCTGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842 ||| || | |||| | | ||||||| | | ||||| ||||| || | Sbjct 14009 --ACCGTTCTCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 13952 Query 115843 AGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898 ||||||| | | ||| | |||||||| ||||| || || ||| || | Sbjct 13951 AGATCCTTGAGAAGCCAGGGG----TTGACAACCTGGAACTCGCCAGCAAGGACTCGGCG 13896 Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958 | |||||||||| || || ||||| |||||||| ||||| || | || || | || Sbjct 13895 TTGGTAGATGTTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGAGGT 13836 Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018 ||| || ||||| || || | ||| || |||||||||| ||| | | | Sbjct 13835 ACTGGCAGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGTCTTGACATC 13776 Query 116019 TTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAAC 116076 || ||||| ||||| || | | | || | || | | |||||| |||||| Sbjct 13775 CTCTCGGAGGGATTCCCACTCCCAAAGGTCAGAA--GGCTTGACATTCCACATGTCAAAC 13718 Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136 ||||| ||||| | || || || || |||| || || || || ||||| ||| Sbjct 13717 TGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTG 13658 Query 116137 GCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 116193 || | | | || | | ||||| ||||| || || ||||| || || | Sbjct 13657 GCGAGCTGTACAGAAGTGGTA---AGGGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTG 13601 Query 116194 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCG 116253 |||| | |||||| || ||||| | | ||| || || |||| || Sbjct 13600 TTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCA 13541 Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313 |||||||| ||||| || ||||| || || || | ||| || || ||||| | Sbjct 13540 AGACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGG 13481 Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTTT-GTG 116370 || || || ||| ||||||| | | || || || | |||||| ||| ||| Sbjct 13480 ACAGGGTAGTGGTTCACGTCGATAATCTTGTTCAGGTT---GCGGACAACGACTTGAGTG 13424 Query 116371 ATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTCTTCATTGACATACTTAGGAAG 116429 | || || ||||| | | | || | || || | || | |||| | || || Sbjct 13423 ACCTCGTGCAGCTTCTTGAAGTCGTAGACAGCATCT-TCGTAGTTGATGAAAGAGGGCAG 13365 Query 116430 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 | | || || || || || |||| | |||||| | | |||||| ||||| || Sbjct 13364 AGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTC 13305 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 || |||| || || || ||||| || | ||||||||| || ||| ||| || Sbjct 13304 AGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCA 13245 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 ||||||||||||||| | || | || ||||| || |||| || |||||| || | Sbjct 13244 GTGATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATA 13185 Query 116610 CCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACT 116662 ||| | | || | | || | | | ||| || |||| |||| |||||||| Sbjct 13184 CCAAAGCTTCTGAGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCGTACT 13132 Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCT 116721 | ||| || ||||| ||||| ||||| ||| || | || || || || | Sbjct 13131 TCTCGTACAGAGCCTCGAACTCATCACCGT-AGCAGTCAGCAAGACCAGGGCACTCGTTG 13073 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || || | |||| ||||| ||| || ||| || |||||||||||||| || |||||| Sbjct 13072 GGGCACATAAGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATC 13013 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAAC 116841 || || ||| ||| || || ||| ||| | || || | || || || || | Sbjct 13012 CAAAGGGCCAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGA 12953 Query 116842 TCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC-CCT 116899 || | || || | || ||| |||||||| || || ||||| | |||| | ||| | Sbjct 12952 TCAAGGAACTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGT 12893 Query 116900 TGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGG 116957 || | | ||| |||||| || || | || || ||| || || || ||||| || Sbjct 12892 CGCTTGTTG-CCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGG 12834 Query 116958 AATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATC 117017 || || ||| | ||| ||||| ||||| ||| ||| | |||| | || Sbjct 12833 AACGACACCGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCG 12774 Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 ||||| || || |||||||| || ||| ||| || || || || | |||| | Sbjct 12773 GTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGT 12714 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 ||||||| || ||||| ||| |||| | | | |||||||| |||| || Sbjct 12713 ATCGTAGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTG 12654 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--G 117195 ||| || |||||||||||||| || || || | || || ||| | | |||| Sbjct 12653 AGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGA--AGAACTTGCTA 12596 Query 117196 GACATCTTATCGTAGGTCTCCAAGACA 117222 ||||| | ||| |||||||||||| Sbjct 12595 GACATGAGGTTGTATGTCTCCAAGACA 12569 >seq700 Length=246488 Score = 159 bits (176), Expect = 4e-34 Identities = 537/823 (65%), Gaps = 35/823 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| | || ||||||||||| ||||| ||||| ||| | || ||| |||||||| Sbjct 28276 GTAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCCAT 28217 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || || || ||||| | | || | | | |||| || | ||| Sbjct 28216 GAAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTG-----CCGAGGGCGACGAGC 28162 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 |||||||| | |||| |||| ||||||| ||| | |||||||| || | || Sbjct 28161 AGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGA 28102 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 ||| ||||| || || || |||| || ||||||| || || || | |||| Sbjct 28101 GCACAAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATG 28042 Query 127466 GCGTGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCA 127522 | || || | | | | || ||| ||| | || | || ||| || ||| Sbjct 28041 TCCTGGATCATCTGCTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGG--CAG-GCA 27985 Query 127523 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 127582 || || ||| |||||||||||||| |||||||| || || ||||| |||||| ||| Sbjct 27984 AAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGGC 27925 Query 127583 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 127642 |||||||| |||||||| | ||||||||| | | ||| | || ||||||||| ||| Sbjct 27924 ATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTGAAGAAGATACCC 27865 Query 127643 TCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTT----TGTATCAAA 127698 || ||| || || |||| ||||||| ||||||||| | ||| || ||| | Sbjct 27864 TCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCCAT 27805 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 | | || ||||| | ||||| || ||| || || | ||| | | || | || Sbjct 27804 CGA----ATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAA 27749 Query 127759 GAGTTCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 ||| | || ||||| || || |||||||| | || ||||| || |||||| Sbjct 27748 GAGGT--AAGTTCTCTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGAGAGTATGTT 27691 Query 127817 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 127875 ||| ||||| | | ||| || | ||| | ||||||| | || || || || Sbjct 27690 TCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCAGGGAT 27632 Query 127876 CTGTACCTCATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 127934 ||| ||||| | || ||| | | | | ||||| ||||| |||||||| | | Sbjct 27631 CTGAACCTC-GCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATCGGAGGCGG 27573 Query 127935 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTC-GTT--CAGGGTCTTCC 127991 |||| || || || || | ||||| | ||| || | | | ||| || | |||| Sbjct 27572 CAAAGAAAGCAAGAATGTGGGAGATGAAGTACTGCTCGTCCGCAGTTAGACGGTTGTTCC 27513 Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| | ||||||||| || ||||| | |||||| || ||||| Sbjct 27512 AGTCATGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 27470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613495037219760