Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq700 181 2e-40
>seq700
Length=246488
Score = 181 bits (200), Expect = 2e-40
Identities = 315/456 (69%), Gaps = 8/456 (2%)
Strand=Plus/Minus
Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976
|||||||| ||||||||| ||| || |||||||| |||||||||| |||||| || |
Sbjct 27996 AGGAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAA 27937
Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA 160036
| || || ||||||| |||||| |||||||| ||||||| ||||| ||||||||
Sbjct 27936 GTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTG 27877
Query 160037 AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG 160096
|| ||||| ||||| || || ||||| || || || | || |||| || | ||| ||
Sbjct 27876 AAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTG 27817
Query 160097 TCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACG 160156
|| ||| |||| | | ||||| |||||||||||| |||||| || ||| || |||
Sbjct 27816 TCCTGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACG 27757
Query 160157 GCGTTAAACA-ATCTGTCCTGCTCCTTCACA---TCCTTGATCAGAGTAGCAATCAGCTT 160212
||||| || | | || || || || |||||||| || |||| |||
Sbjct 27756 GCGTTGAAGAGGTAAGTTCT----CTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG 27701
Query 160213 CGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGC 160272
||||| |||| | ||| | || || || ||||| || |||||| || ||
Sbjct 27700 AGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGC 27641
Query 160273 CTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332
||| | ||| ||||| |||| | | | | || || | || || | || ||
Sbjct 27640 CTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATC 27581
Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAA 160368
|| ||| ||||||||||| | | ||| ||||||||
Sbjct 27580 GGAGGCGGCAAAGAAAGCAAGAATGTGGGAGATGAA 27545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795139436048160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |