Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq700 181 2e-40 >seq700 Length=246488 Score = 181 bits (200), Expect = 2e-40 Identities = 315/456 (69%), Gaps = 8/456 (2%) Strand=Plus/Minus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 |||||||| ||||||||| ||| || |||||||| |||||||||| |||||| || | Sbjct 27996 AGGAGGCAGGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAA 27937 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA 160036 | || || ||||||| |||||| |||||||| ||||||| ||||| |||||||| Sbjct 27936 GTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCAAAGGCACCGCTG 27877 Query 160037 AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTG 160096 || ||||| ||||| || || ||||| || || || | || |||| || | ||| || Sbjct 27876 AAGAAGATACCCTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGAAGAGTTCTTG 27817 Query 160097 TCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACG 160156 || ||| |||| | | ||||| |||||||||||| |||||| || ||| || ||| Sbjct 27816 TCCTGGATCCATCGAATAGCCCAATCAGCCTTCTTTCGGATGCAAGGAATGGTGTCAACG 27757 Query 160157 GCGTTAAACA-ATCTGTCCTGCTCCTTCACA---TCCTTGATCAGAGTAGCAATCAGCTT 160212 ||||| || | | || || || || |||||||| || |||| ||| Sbjct 27756 GCGTTGAAGAGGTAAGTTCT----CTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGCAG 27701 Query 160213 CGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGC 160272 ||||| |||| | ||| | || || || ||||| || |||||| || || Sbjct 27700 AGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGC 27641 Query 160273 CTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332 ||| | ||| ||||| |||| | | | | || || | || || | || || Sbjct 27640 CTCAGGGATCTGAACCTCGCCGCTGAATCGCTCAACAAGGTTCTCGTTGACAATACCATC 27581 Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAA 160368 || ||| ||||||||||| | | ||| |||||||| Sbjct 27580 GGAGGCGGCAAAGAAAGCAAGAATGTGGGAGATGAA 27545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795139436048160