Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq391 91.5 6e-13
>seq391
Length=65998
Score = 91.5 bits (100), Expect = 6e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || || || || || || || || ||||| || || || |||
Sbjct 44900 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCT 44841
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | | || || ||||| || ||||| || ||||||||||| ||
Sbjct 44840 GATACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 44781
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || || |||||| | || || || ||||| || || | || || | || || ||
Sbjct 44780 CAGCGATTGATTTTCGCCGGCAAGCAGCTTGAGGACGGGCGCACCCTGTCTGACTACAAC 44721
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
||| | ||||| |||| |||||
Sbjct 44720 ATTCAGAAGGAATCAACCCTTCA 44698
Score = 89.7 bits (98), Expect = 2e-12
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || || || || || ||||| || || || |||
Sbjct 44672 ATGCAAATATTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCT 44613
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | | || || ||||| || ||||| || ||||||||||| ||
Sbjct 44612 GATACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 44553
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || || |||||| | || || || || |||||||| | || | | || || ||
Sbjct 44552 CAGCGATTGATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTCTCCGACTACAAC 44493
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
|| | ||||| | || ||||||
Sbjct 44492 ATCCAGAAGGAGTCCACTCTTCAC 44469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975678252167288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |