Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2 206 3e-48
seq147 158 2e-33
seq839 102 1e-16
seq1366 91.5 2e-13
seq1310 84.2 3e-11
>seq2
Length=329948
Score = 206 bits (228), Expect = 3e-48
Identities = 425/629 (68%), Gaps = 6/629 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || |||||||||||||| || || || || || | || || || ||||||||
Sbjct 34305 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTAACCTCGAAGATACCC 34246
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | || ||||| || ||||||||||| || || || || || ||
Sbjct 34245 TCCTCAATGGTAAGGAGAGAGACATCGAAGGTACCACCACCAAGATCGAAGATCAGGACA 34186
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| ||| | || ||||| ||||||||||| || || || || || || || ||
Sbjct 34185 TTGCGCTCGCCCTCGACCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCGGTAGGCTCG 34126
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || ||| ||| || || || || | ||||| || || || || ||
Sbjct 34125 TTGATGATTCGGAGAACGTTGAGACCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGC 34066
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| || ||||| |||||||| ||||| || || || |||| |||| ||| |||||
Sbjct 34065 TGAGAGTCGTTGAAGTAGGCAGGGACGGTGACAACGGCGTTGTTGACAGTCTCGCCGAGG 34006
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || || | || ||| ||||| || | ||| | || ||||| || | |
Sbjct 34005 TAAGACTCAGCAGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCGGGAGTG 33946
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876
|| ||| | ||||| || || ||||| || || |||| || |||| | | |
Sbjct 33945 AAGGTCTTCTTCTCACCCTTGAACTCAACCTCGATGTTGGGCTT-GCCGC--CCTTGTCG 33889
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
| | | | | | | ||||| ||| | ||||||| || | |||||| |
Sbjct 33888 ACGATTGTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGGCAAACTTGCGA 33829
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
||||| | ||||| || || || |||||||| | |||||||||||| ||||||||
Sbjct 33828 CCGATCAATCGCTTGGCGTCGAAGACTGTGTTCTGGGGGTTCATGGCGACCTGGTTCTTG 33769
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| || || || || ||||| || | || || || ||||| | || ||||| |||
Sbjct 33768 GCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAACCGACGAATGAGGGGGTAGTT 33712
Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|| || || |||||||| || || || ||
Sbjct 33711 CGGTTACCCTGGTCGTTGGCGATGATATC 33683
Score = 138 bits (152), Expect = 1e-27
Identities = 527/829 (64%), Gaps = 19/829 (2%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
|| || || || || ||||| || ||||| | | ||| ||||| || || || ||
Sbjct 35311 TCGTCCTCCTCCTTGTACTTCTCAGCATCGTTAAGCATGCGCTCAATCTCCTCCTTGGAC 35252
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| || || || || |||||| | ||| || || | |||| || |
Sbjct 35251 AGGCGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCGGTACCCTTCTCGACG 35192
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||||| |||||| | || | ||| || || |
Sbjct 35191 GCGGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATCTGGGGGACA 35132
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | || ||||| || | || || | || | | |||| ||| |
Sbjct 35131 CCACGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATAAGGTTGTTGTCCTTG 35072
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| || || ||||| || ||||| | || || |||| || || ||
Sbjct 35071 GTGCGCTGGCGCTCACCCTCGTAGACCTGGATAAGGACACCAGGCTGGTTGTCGGAGAAG 35012
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||||| | ||||| | || || || || |||| || || | | ||||
Sbjct 35011 GTAGAGAAGACCTCAGACTTCTTGGTGGGGATGGTGGTGTTTCGGGGGATGAGCTTGGTC 34952
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| || ||||| || |||| || ||||| ||||| | ||||||| ||| | |
Sbjct 34951 ATCATGCCACCAGCGGTCTCGATACCGAGAGAGAGAGGGGCGACGTCCAGGAGGAGGA-- 34894
Query 6989 TCTTGAACAGATTCGTTCCCTT-----------CACCCGTTAAGATGGCGGCTTGGACCG 7037
||| | || || |||| |||| | | ||||| || ||||| |
Sbjct 34893 TCTCG------TTGGTGGCCTTGCTAGAGGTGTCACCGGAGAGAATGGCAGCCTGGACAG 34840
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
|| ||||| || || |||||||||||||| || | || || | || || ||||| |
Sbjct 34839 CGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTTCCGTTGA 34780
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| || || | | | | || | ||||| || || ||||||||||| | ||||
Sbjct 34779 AGTAGTCGGTGATGAGCTTCTGGACACGGGGGATACGGGTAGATCCACCGACGAGGACGA 34720
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217
| || | || || || |||||||| | ||| ||| ||||| || | |
Sbjct 34719 TCTCGTGGACAAGGGACTTGTCGATCTTAGCGTCGGTAAGGACACGGTCGACGGGCTGGA 34660
Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277
|| ||||| | ||| || || ||||| ||||| |||||||| ||||| || |
Sbjct 34659 TAGTGGATCGGAAAAGATCCTGGCAGAGCTCCTCGAAACGAGCACGGGTGATGGAGGTGT 34600
Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337
|||| |||| || ||| | | || || || ||||||| || || || | ||||| |
Sbjct 34599 AGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCGGAAGAAGAAA 34540
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386
|||||||| || |||||||| || ||||| | ||| || || |||||
Sbjct 34539 GAGTTCGCTTGGCACGCTCACAAGCGGTTCGGAGACGTCGGAGAGCACG 34491
>seq147
Length=79699
Score = 158 bits (174), Expect = 2e-33
Identities = 363/542 (67%), Gaps = 15/542 (3%)
Strand=Plus/Minus
Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306
||||| ||||| |||||||| ||||| | ||| || | |||||| | | || |||
Sbjct 27485 TCCTCGAAACGGGCACGGGTGATGGACATGGTGAAGTCCTCACCGTCGAAGAGAGAGTCA 27426
Query 7307 ATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364
|| |||||||| | || || || | ||| | || ||||| || |||||||| || |
Sbjct 27425 ATCTCAATGGTGGCCTGGGCACCGCTGGAGAGA--GTACGCTTGGCACGCTCACAAGCAG 27368
Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAA 7424
|||| | ||| || |||||||| | | || || | || ||||| || || |
Sbjct 27367 TTCGGAGACGTCGGAGGGCACGGGCATCGCCAGAGAGGTCCTTCTTGGTCTTGCGACCGA 27308
Query 7425 ACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483
|||| | | |||| |||| |||| | | ||||| || | |||||| | || |||
Sbjct 27307 ACTCCTTCTTGCAGTGGTCGA-GGAGGTTAGTGTCGAAGTCCTGACCACCGAGATGGGTA 27249
Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543
|| || || || || ||||| |||| ||| || | ||||| | | || |||||
Sbjct 27248 TCTCCGGCAGTGGCCTTGACAGTGAAGACACCACCCTGGATGTTGAGGAGGGAGACATCG 27189
Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCG 7603
|| ||||||||||| || || | ||||| ||||| || | || | |||| ||
Sbjct 27188 AAAGTACCACCACCGAGATCGTAGATGAGGACGTTGCGCTCCTTCTC---GGACTTACCG 27132
Query 7604 ------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC 7657
|||||||| || || || || || || || || || || ||||| || |||
Sbjct 27131 GCACCAAGACCGTAGGCAATGGCGGCGGCAGTAGGCTCGTTGATGATACGGAGGACGTTA 27072
Query 7658 AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCC 7717
|| || ||||| | | || || || || || || || || ||||| ||||||||
Sbjct 27071 AGACCGGCAATGGAACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCG 27012
Query 7718 GGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTC 7777
||||| || | ||| || | | ||| ||||||||||| | | || || || || |||
Sbjct 27011 GGGACAGTGATGACGGCCTTCTCGACCTTCTTACCGAGCTTGGTCTCGGCAATCTCCTTC 26952
Query 7778 AT 7779
||
Sbjct 26951 AT 26950
>seq839
Length=23613
Score = 102 bits (112), Expect = 1e-16
Identities = 419/656 (64%), Gaps = 15/656 (2%)
Strand=Plus/Minus
Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522
||||| |||||||| ||| | || ||||| | |||||| ||| | |||||| |
Sbjct 13138 TCGTACTTCTCGTACAGAGCCTCGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCAC 13079
Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582
| | || || | | | ||| | |||| || || || |||||||| | |||
Sbjct 13078 TCGTTGGGGCACATAAGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCA 13019
Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642
|| ||||| | ||| || ||||| ||| | |||| || | ||| || |||
Sbjct 13018 GGGATCCAAAGGGCCAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTT 12959
Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGAC 105702
|| | || || || |||| | |||||||||||| || || | |||| || | |
Sbjct 12958 CGGAGATCAAGGAACTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCA 12899
Query 105703 CCTTTACGACGC------CCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGT 105756
|| | | ||| || | || | ||| || | || || ||| |||| ||
Sbjct 12898 CC---AGGTCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGC 12842
Query 105757 AACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCA 105816
| ||| |||| | ||| | || || ||||| || || ||| | || | |||
Sbjct 12841 AGCATGGGAACGACACCGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCA 12782
Query 105817 CGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCT 105876
|| | ||| |||| || |||||||| |||||| ||| || |||||
Sbjct 12781 CGGATTCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTC 12722
Query 105877 TTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGAT 105936
|| | |||||||| ||||||||||| || || ||||| | ||| ||||| || ||
Sbjct 12721 TTGAGGGTATCGTAGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAG 12662
Query 105937 GACATTTGTGGTCTG-GGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAA 105995
|||| || || ||| || |||||||| ||||| || || || | |||||| |||| ||
Sbjct 12661 GACAGCTGAGG-CTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAA 12603
Query 105996 ACCTT--TCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATA 106053
||| | || | | |||||| |||| ||| | || ||||| | || |||
Sbjct 12602 --CTTGCTAGACATGAGGTTGTATGTCTCCAAGACACGTTCGATATCATCACCCCAGATA 12545
Query 106054 CCAATAGCGACGCGCATATAGAGATATTGGGGTGTTTCAATAATTTCACCGTCAAT 106109
|||| ||| || ||||| | | ||| || ||| ||||| |||||||||
Sbjct 12544 CCAACAGCAACACGCATGATCATGTGTTGAGGACGCTCAGCAATTTTACCGTCAAT 12489
>seq1366
Length=104692
Score = 91.5 bits (100), Expect = 2e-13
Identities = 168/243 (69%), Gaps = 5/243 (2%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||| | ||| || || || ||||| || || || ||||||||
Sbjct 16178 TCGAAATCCTCACCACCAAGGTGGGTGTCACCAGCGGTAGCGAGAACCTCGAAGATACCG 16237
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| ||||| | || |||||||| || ||||||||||| || || | || | |
Sbjct 16238 TCGTCAATAGAGAGCAGAGAAACATCGAAGGTACCACCACCGAGATCGTA---GACAATG 16294
Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | || || | | |||||| || |||||||| |||||||| || || || || ||
Sbjct 16295 ATC-TGGCGCTCACCATCGTTCTTGTCAAGACCGTAGGCGATAGCGGCGGCGGTGGGCTC 16353
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | ||| || || ||| || || ||||| | | || || || || || |||||
Sbjct 16354 GTTGACAATTCGGAGGACGTTGAGACCGGCAATGATACCGGCGTCCTTGGTGGCCTGTCG 16413
Query 7696 TTG 7698
||
Sbjct 16414 CTG 16416
Score = 82.4 bits (90), Expect = 1e-10
Identities = 96/130 (74%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||| |||||||| ||||| || || || |||| ||||| ||||||||||| || |
Sbjct 16474 CGTTGAAGTAGGCAGGGACGGTAACAACGGCGTGGGTGACCTTCTTACCGAGGTAGCCCT 16533
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| |||| || ||||| ||| |||||||| | |||||||| |||| | ||||| |
Sbjct 16534 CAGCGACCTCCTTCATCTTGCCGAGAACCATGGCAGAAATCTCCTCAGGAGTGAACTGCT 16593
Query 7824 TCGTTTCACC 7833
|| | ||||
Sbjct 16594 TCTTGGCACC 16603
>seq1310
Length=106642
Score = 84.2 bits (92), Expect = 3e-11
Identities = 140/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| ||||||||||| || | ||| || || || || || || | || ||| || |||
Sbjct 52659 CTTCTCGAGACCGTAGGCAAGAGCGGCGGCAGTAGGCTCGTTGACAACACGGAGGACGTT 52600
Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCT-TGTCGTTGCGAATCGTTAAAGTA 7713
||||| ||||| ||| | || || || || ||| ||||| || || ||||| |||||
Sbjct 52599 GAGGCCGGCAAT--TTGACCAGCGTCCTTGGT-GCTCTGTCGCTGAGAGTCGTTGAAGTA 52543
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773
||| ||||| || || || |||| | ||| |||| ||| || | || ||| | ||
Sbjct 52542 GGCGGGGACGGTGACAACGGCGTTCTTGATGGGCTTAGAGAGGTAGGCCTCGGCGGTCTC 52483
Query 7774 TTTCATTTTGGTAAGAAC 7791
||||| ||| | || ||
Sbjct 52482 CTTCATCTTGTTGAGGAC 52465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635120208492240
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