Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq839 201 1e-46
seq700 161 1e-34
seq921 96.9 4e-15
>seq839
Length=23613
Score = 201 bits (222), Expect = 1e-46
Identities = 531/801 (66%), Gaps = 25/801 (3%)
Strand=Plus/Plus
Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678
||||| ||||||| || || | |||||| || || ||||| || ||| |||||||
Sbjct 12520 ACATGATCATGCGTGTTGCTGTTGGTATCTGGGGTGATGATATCGAACGTGTCTTGGAGA 12579
Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATC---CACGCAACACCAACCCTCTTCAACG 111735
||||| || ||||| | | | |||| || || || | || || || |||||||
Sbjct 12580 CATACAACCTCATGTC---TAGCAAGTTCTTCACTCATGCTTCCCCCACACTATTCAACG 12636
Query 111736 CTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAA 111795
||||||| || || || ||||| || |||||| ||| | |||||||| |
Sbjct 12637 CTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTGATATGAAGGAGGACAGCA 12696
Query 111796 TCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTA 111855
|| | || || |||| || |||| |||||| || || ||| |||||||||||
Sbjct 12697 TCGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTA 12756
Query 111856 TCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTC 111915
| || || || |||| || | |||| | ||| ||| || || ||||||
Sbjct 12757 TTGGCTTGAACGTCCACCGAATCCGTGCCACCGGCTCTTACATTGCCGGGACCAATGGTA 12816
Query 111916 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACC 111975
|| | ||| | |||| ||||| || || || ||| ||| || || || || |||
Sbjct 12817 CTTCTAACGGTGTCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTCGACC 12876
Query 111976 AAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGG 112029
| | ||| |||| || || |||| |||| || ||||| |||||||| |
Sbjct 12877 AGGGTGGCAA---CAAGCGACCTGGTGCCTTCGCTATCTACCTCGAGCCCTGGCACGCCG 12933
Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCG 112087
|| || | ||||||||||| | || ||||| ||| | ||||||| |||| | ||
Sbjct 12934 ATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCT--CG 12991
Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147
|| || ||| || || ||||| || ||||||||||||||| | || ||| ||| |||
Sbjct 12992 TGACCTGTTCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAATGG 13051
Query 112148 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGA 112207
| | ||| |||| | || || || || || ||||| | || | ||||| ||
Sbjct 13052 CGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATGA 13111
Query 112208 GTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCA-- 112265
||| || || || ||| ||||||||| ||| || || | | || | | ||
Sbjct 13112 GTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGG-GTC-GCAAGTCTATCAAG 13169
Query 112266 GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATAT 112324
||| | || | | ||| | || |||||| || | || || |||||||| | || | ||
Sbjct 13170 GCT-CAGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGGAAACCCTTTCAT 13228
Query 112325 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 112384
||| ||||| || ||| |||| ||||| || |||||||| | ||| ||| ||
Sbjct 13229 GCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAG 13288
Query 112385 TTCCAACCTCTGTACAGAAAT 112405
|||||||| || || || ||
Sbjct 13289 CTCCAACCTGTGCACTGAGAT 13309
>seq700
Length=246488
Score = 161 bits (178), Expect = 1e-34
Identities = 358/523 (68%), Gaps = 13/523 (2%)
Strand=Plus/Plus
Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873
||||| || || ||| | ||||| || |||||| | | || ||||| | ||||| |
Sbjct 27470 TGGACAGCCGAGGAGATCGATCTTTCCAAGGATCTCCATGACTGGAACAACCGTCTAACT 27529
Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933
| | || || | ||||| |||| || || |||||||| | |||||||| |||
Sbjct 27530 GCGGACGAGCAGTACTTCATCTCCCACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATT 27589
Query 101934 GTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991
|| ||||| | | | | | | || | ||||| || |||| |||| || |||
Sbjct 27590 GTCAACGAGAACCTTGTTGAGCGATTCAGCGGC-GAGGTTCAGATCC-CTGAGGCTCGAT 27647
Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050
||||| | || || | |||| ||| | | | || || |||||| | |||
Sbjct 27648 GCTTCTACG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCTCTGCTC 27706
Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110
|| |||| || || ||||| |||| ||| | | ||||| | ||| | | ||
Sbjct 27707 ATTGACACCTACATCAAGGAGCCTGCTCAGAGAACTTACCTCTTCAACGCCGTTGACACC 27766
Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 102169
|||| || || | |||||| || ||||||||||| ||| | | |||| | |
Sbjct 27767 ATTCCTTGCATCCGAAAGAAGGCTGATTGGGCTATTCGATGGATCCAGGACAAGAACTC- 27825
Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229
||||||||| |||| || | || ||||| ||||||||||||||||||| ||| |
Sbjct 27826 TTCCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGC 27885
Query 102230 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288
||| ||| | |||| |||||||||||||| ||||||||||| ||||| ||||| |
Sbjct 27886 CTT-TGCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTA 27944
Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||||| ||||||||||||||||| || ||| || |||||
Sbjct 27945 ACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 27987
>seq921
Length=435044
Score = 96.9 bits (106), Expect = 4e-15
Identities = 299/450 (66%), Gaps = 21/450 (5%)
Strand=Plus/Minus
Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944
||||| || || || || || | | || | ||| || ||||| | || || || |
Sbjct 338572 CGATCGAATCGTCCAGGTCGCATCAAGGCCTTATCCAGCATATCCGCTCGGTTAGTACCA 338513
Query 15945 GCGATGACAACAATACCTGTTTC--GTTATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002
|||| |||||| | |||||| | | | ||| || ||||| ||||| | || |||||
Sbjct 338512 GCGAGGACAACCA--CCTGTTCACGGGTGTTAAAGCCGTCCATTTCTGTAAGAATCTGGT 338455
Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCAC---CAGCACTGC-GTTGCTTT 16058
| | || ||| ||||| || || || | || | | | | || || || ||
Sbjct 338454 TCAGGGTCGCTTCACGTTCGTCGTT-GCCGCCAAAACCCTTGCCGCTCTCTTGTCGCGCG 338396
Query 16059 C---CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115
| | | ||| |||||||| || ||||||| ||| || || || | ||| | |
Sbjct 338395 CGACCGATGGCGTCAATCTCGTCGATGAAGATGATACAGGGAGCGTTCTTACGACCCTCG 338336
Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 16175
| || || || ||||||||| | || ||||||||||||||||| ||||| | | |
Sbjct 338335 GCGAATAGGTCTCGTACACGCGAAGGTCCAACACCAACAAACATCTCGACAAATTCGGAG 338276
Query 16176 GC-GGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234
| ||| | || |||||| || || ||||| || |||| ||| || | ||
Sbjct 338275 CCACTCACACT-GAAGAAGGGCACTCCGGACTCACCAGCCGTGGCCTTGGCAAGCAACGT 338217
Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTT 16292
||||| ||||| || || || | || |||||||||||| |||||||| || |||
Sbjct 338216 TTTACCAGTACCAGGGGGTCCAGCCAAGATGGCACCTCGTGGGATCTTGGCACCTAGCTT 338157
Query 16293 C-CAAAGTATCTCTCAGGTTGCTT-AAGAA 16320
| |||| | ||||||| ||||| |||||
Sbjct 338156 CTCAAACT---TCTCAGGCTGCTTCAAGAA 338130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620730093781920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |