Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq839 201 1e-46 seq700 161 1e-34 seq921 96.9 4e-15 >seq839 Length=23613 Score = 201 bits (222), Expect = 1e-46 Identities = 531/801 (66%), Gaps = 25/801 (3%) Strand=Plus/Plus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| ||||||| || || | |||||| || || ||||| || ||| ||||||| Sbjct 12520 ACATGATCATGCGTGTTGCTGTTGGTATCTGGGGTGATGATATCGAACGTGTCTTGGAGA 12579 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATC---CACGCAACACCAACCCTCTTCAACG 111735 ||||| || ||||| | | | |||| || || || | || || || ||||||| Sbjct 12580 CATACAACCTCATGTC---TAGCAAGTTCTTCACTCATGCTTCCCCCACACTATTCAACG 12636 Query 111736 CTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAA 111795 ||||||| || || || ||||| || |||||| ||| | |||||||| | Sbjct 12637 CTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTGATATGAAGGAGGACAGCA 12696 Query 111796 TCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTA 111855 || | || || |||| || |||| |||||| || || ||| ||||||||||| Sbjct 12697 TCGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGATGGCTGGTGGTA 12756 Query 111856 TCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTC 111915 | || || || |||| || | |||| | ||| ||| || || |||||| Sbjct 12757 TTGGCTTGAACGTCCACCGAATCCGTGCCACCGGCTCTTACATTGCCGGGACCAATGGTA 12816 Query 111916 AATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACC 111975 || | ||| | |||| ||||| || || || ||| ||| || || || || ||| Sbjct 12817 CTTCTAACGGTGTCGTTCCCATGCTGCGTGTGTTCAACAACACTGCTCGTTACGTCGACC 12876 Query 111976 AAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGG 112029 | | ||| |||| || || |||| |||| || ||||| |||||||| | Sbjct 12877 AGGGTGGCAA---CAAGCGACCTGGTGCCTTCGCTATCTACCTCGAGCCCTGGCACGCCG 12933 Query 112030 ATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCG 112087 || || | ||||||||||| | || ||||| ||| | ||||||| |||| | || Sbjct 12934 ATGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCT--CG 12991 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 || || ||| || || ||||| || ||||||||||||||| | || ||| ||| ||| Sbjct 12992 TGACCTGTTCCTGGCCCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAATGG 13051 Query 112148 CAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGA 112207 | | ||| |||| | || || || || || ||||| | || | ||||| || Sbjct 13052 CGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATGA 13111 Query 112208 GTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCA-- 112265 ||| || || || ||| ||||||||| ||| || || | | || | | || Sbjct 13112 GTTCGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGG-GTC-GCAAGTCTATCAAG 13169 Query 112266 GCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATAT 112324 ||| | || | | ||| | || |||||| || | || || |||||||| | || | || Sbjct 13170 GCT-CAGAAGCTTTGGTATGCCATTCTCGAGGCCCAGACAGAGACTGGAAACCCTTTCAT 13228 Query 112325 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 112384 ||| ||||| || ||| |||| ||||| || |||||||| | ||| ||| || Sbjct 13229 GCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAG 13288 Query 112385 TTCCAACCTCTGTACAGAAAT 112405 |||||||| || || || || Sbjct 13289 CTCCAACCTGTGCACTGAGAT 13309 >seq700 Length=246488 Score = 161 bits (178), Expect = 1e-34 Identities = 358/523 (68%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||| || || ||| | ||||| || |||||| | | || ||||| | ||||| | Sbjct 27470 TGGACAGCCGAGGAGATCGATCTTTCCAAGGATCTCCATGACTGGAACAACCGTCTAACT 27529 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 | | || || | ||||| |||| || || |||||||| | |||||||| ||| Sbjct 27530 GCGGACGAGCAGTACTTCATCTCCCACATTCTTGCTTTCTTTGCCGCCTCCGATGGTATT 27589 Query 101934 GTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991 || ||||| | | | | | | || | ||||| || |||| |||| || ||| Sbjct 27590 GTCAACGAGAACCTTGTTGAGCGATTCAGCGGC-GAGGTTCAGATCC-CTGAGGCTCGAT 27647 Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||| | || || | |||| ||| | | | || || |||||| | ||| Sbjct 27648 GCTTCTACG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAAACATACTCTCTGCTC 27706 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || |||| || || ||||| |||| ||| | | ||||| | ||| | | || Sbjct 27707 ATTGACACCTACATCAAGGAGCCTGCTCAGAGAACTTACCTCTTCAACGCCGTTGACACC 27766 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGCG 102169 |||| || || | |||||| || ||||||||||| ||| | | |||| | | Sbjct 27767 ATTCCTTGCATCCGAAAGAAGGCTGATTGGGCTATTCGATGGATCCAGGACAAGAACTC- 27825 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 ||||||||| |||| || | || ||||| ||||||||||||||||||| ||| | Sbjct 27826 TTCCTTTGCCCAGCGTCTTGTTGCCTTTGCTGCTGTTGAGGGTATCTTCTTCAGCGGTGC 27885 Query 102230 CTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 ||| ||| | |||| |||||||||||||| ||||||||||| ||||| ||||| | Sbjct 27886 CTT-TGCTTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTGACTTTCTCTA 27944 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||| ||||||||||||||||| || ||| || ||||| Sbjct 27945 ACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGC 27987 >seq921 Length=435044 Score = 96.9 bits (106), Expect = 4e-15 Identities = 299/450 (66%), Gaps = 21/450 (5%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 ||||| || || || || || | | || | ||| || ||||| | || || || | Sbjct 338572 CGATCGAATCGTCCAGGTCGCATCAAGGCCTTATCCAGCATATCCGCTCGGTTAGTACCA 338513 Query 15945 GCGATGACAACAATACCTGTTTC--GTTATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 |||| |||||| | |||||| | | | ||| || ||||| ||||| | || ||||| Sbjct 338512 GCGAGGACAACCA--CCTGTTCACGGGTGTTAAAGCCGTCCATTTCTGTAAGAATCTGGT 338455 Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCAC---CAGCACTGC-GTTGCTTT 16058 | | || ||| ||||| || || || | || | | | | || || || || Sbjct 338454 TCAGGGTCGCTTCACGTTCGTCGTT-GCCGCCAAAACCCTTGCCGCTCTCTTGTCGCGCG 338396 Query 16059 C---CCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115 | | | ||| |||||||| || ||||||| ||| || || || | ||| | | Sbjct 338395 CGACCGATGGCGTCAATCTCGTCGATGAAGATGATACAGGGAGCGTTCTTACGACCCTCG 338336 Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 16175 | || || || ||||||||| | || ||||||||||||||||| ||||| | | | Sbjct 338335 GCGAATAGGTCTCGTACACGCGAAGGTCCAACACCAACAAACATCTCGACAAATTCGGAG 338276 Query 16176 GC-GGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 | ||| | || |||||| || || ||||| || |||| ||| || | || Sbjct 338275 CCACTCACACT-GAAGAAGGGCACTCCGGACTCACCAGCCGTGGCCTTGGCAAGCAACGT 338217 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTT 16292 ||||| ||||| || || || | || |||||||||||| |||||||| || ||| Sbjct 338216 TTTACCAGTACCAGGGGGTCCAGCCAAGATGGCACCTCGTGGGATCTTGGCACCTAGCTT 338157 Query 16293 C-CAAAGTATCTCTCAGGTTGCTT-AAGAA 16320 | |||| | ||||||| ||||| ||||| Sbjct 338156 CTCAAACT---TCTCAGGCTGCTTCAAGAA 338130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620730093781920