Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16] 1,586 sequences; 37,543,021 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq839 255 7e-63 seq921 170 2e-37 >seq839 Length=23613 Score = 255 bits (282), Expect = 7e-63 Identities = 1057/1650 (64%), Gaps = 47/1650 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 |||||||||||||| || || |||||| || || ||||| | | | | | | | Sbjct 14137 GACTGAGACTGATCAATAAAGGCACCACGGTCGGCAGCCATCTGCACAA----CCTGTCG 14082 Query 109567 CT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGAT 109622 || ||| ||||| ||||||||||||| | ||||| ||| | || |||| ||| Sbjct 14081 CTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGACATCGGCAGGGATGTTGGGGAT 14022 Query 109623 GTTTTGAATAGAGCCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAG 109679 ||| || ||||| ||| || | |||| | | |||||| | | ||||| || Sbjct 14021 GTTCTGGATAGA---ACCGTTCTCAGCAATGATACGGTTCTTCATAGCATCGGACCAAAG 13965 Query 109680 ACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAG 109739 ||| | | ||||| | | ||| |||||| || || || |||||||| Sbjct 13964 ACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCAGCAAG 13905 Query 109740 TGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGAT 109799 || || |||||||||| | || ||||| ||||| ||||| |||||||| || || Sbjct 13904 GACTCGGCGTTGGTAGATGTTGGAGGTATAGGGCTCGAAGCACTCGTTGTTGCCAAGAAT 13845 Query 109800 TTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGT 109859 || | || || || ||||| ||||| | ||| |||||||| |||| ||| | || Sbjct 13844 CTGCGAGGTACTGGCAGTAGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAGT 13785 Query 109860 CTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATC 109919 ||| || ||| || | | ||||| || || | || | | || ||| Sbjct 13784 CTTGACATCCTCTCGGAGGGATTCCCACTCCCAAAGGTCAGAA------GGCTTGACATT 13731 Query 109920 CCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGA 109979 |||||| || || || | |||||||| |||||||| |||||||| | ||| | Sbjct 13730 CCACATGTCAAACTGGAGAATACCCTCAGAGGCAGGAGAGCCCTTGAAGGTGGAGTAGGG 13671 Query 109980 CCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAA 110039 ||||| ||| ||| | || |||| || || || || || || ||||| || Sbjct 13670 ACCCTCCTCCTTGGCGAGCTGTACAGAAGTGGTAAGGGCAGCGTGGTAGATGGTCTCGAA 13611 Query 110040 AATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAA 110099 || || |||| |||| ||| | | || ||||| | | | || || Sbjct 13610 GATTTGCTTGTTCAGCTCACGAGCCTCGGGAGACTCAAAGGGCATGCGGAGAGCAAGGAA 13551 Query 110100 CACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCG 110159 |||| || ||||| |||||||| ||||||||||| || || |||||| | || Sbjct 13550 GGCATCAGCAAGACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCG 13491 Query 110160 AGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGT 110219 ||| || || ||||| ||| |||||| | | || || || | || | Sbjct 13490 AGCCTCTTGGACAGGGTAGTGGTTCACGTCGATAATCTTGTTCAGGTTGCG-GACAACGA 13432 Query 110220 CTTC-GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATAT 110277 ||| |||| || || || || | | | ||| | | | ||| | || |||| | Sbjct 13431 CTTGAGTGACCTCGTGCAGCTTCTTGAAGTCGTA-GACAGCATCTTCGTAGTTGATGAAA 13373 Query 110278 TTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCC 110337 ||| |||| | || ||||| ||||| |||| ||| || || ||| || Sbjct 13372 GAGGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCA 13313 Query 110338 AAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG 110397 | ||| || || |||| |||||| || ||| ||| | |||||| || || ||| Sbjct 13312 ATAATCTCAGTGCACAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTG 13253 Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457 |||||| |||||| ||||||||| | ||| | ||||| || ||||| | || |||| Sbjct 13252 CGGTTGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGA 13193 Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGG-ACAGTTGCGTTAGCGAGACCTTCCTCCTCGT 110515 ||||| | ||| | | || | | | | | | ||||| | | ||| || ||||| Sbjct 13192 ATGGCATACCAAAGCTTCTGAGCCTTGATAGACTTGCG--ACCCTTACCCTCTCTCTCGT 13135 Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGT 110575 |||| ||||| |||| || || | ||||| |||| |||||| || || Sbjct 13134 ACTTCTCGTACAGAGCCTCGAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGT 13075 Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAA 110635 ||| || | || | ||| | ||| || ||| || | ||||||||| || ||||| | Sbjct 13074 TGGGGCACATAAGAGTCCATTCGCCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGA 13015 Query 110636 TCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTA 110695 |||| | ||| ||| |||||||| || |||| || | ||| ||||| || | Sbjct 13014 TCCAAAGGGCCAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGA 12955 Query 110696 GCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCT 110755 | || | || || | || ||| | |||||| || ||||| |||| ||||| || || Sbjct 12954 GATCAAGGAACTCGAAGACATCGGCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACC-- 12897 Query 110756 TACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCA 110809 | | || || |||||| || || || || ||| ||||| || | |||| Sbjct 12896 -AGGTCGCTTGTTGCCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCA 12838 Query 110810 TAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAA 110869 | |||| | || | || |||||| || || ||| || ||||||| | Sbjct 12837 TGGGAACGACACCGTTAGAAGTACCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGA 12778 Query 110870 TGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGTG 110928 | ||||| | || ||||||||||| ||| ||| ||| |||| | ||| || Sbjct 12777 TTCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCT-TG 12719 Query 110929 AGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGAC 110988 || ||| | || ||||| || || || |||| | ||| || ||||| || ||| Sbjct 12718 AGGGTATCGTAGATACCGTCGATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGAC 12659 Query 110989 ATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT 111048 | |||||| |||| || || || ||||| ||||| || | |||||| ||| ||| || Sbjct 12658 AGCTGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGA--AGAACT 12601 Query 111049 TG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAATACC 111104 || ||||| ||||||||| || | | | | | | ||| | ||| ||||| Sbjct 12600 TGCTAGACATGAGGTTGTATGTCTCCAAGAC--ACGTTCGATATCATCACCCCAGATACC 12543 Query 111105 AATGGCAACTCGCATGAACATATATTGAGG 111134 || ||||| ||||||| ||| | |||||| Sbjct 12542 AACAGCAACACGCATGATCATGTGTTGAGG 12513 >seq921 Length=435044 Score = 170 bits (188), Expect = 2e-37 Identities = 348/508 (69%), Gaps = 22/508 (4%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||| || || || || | | || | ||| || ||||| | ||||| ||| | Sbjct 338572 CGATCGAATCGTCCAGGTCGCATCAAGGCCTTATCCAGCATATCCGCTCGGTTAGTACCA 338513 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | || || ||| ||| || |||||||||||||| |||| |||| Sbjct 338512 GCGAGGACAACCA--CCTGT-TCACGGGTGTTAAAGCCGTCCATTTCTGTAAGAATCTGG 338456 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTTCTT---- 11675 || | ||| |||||| || |||||| | | ||| | ||||| | ||| | Sbjct 338455 TTCAGGGTCGCTTCACGTTCGTCGTTGCCGCCAAAACC-CTTGCCGCTCTCTTGTCGCGC 338397 Query 11676 ---ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTG 11732 ||||| ||||||||||| |||||||| | |||||| || ||| ||| ||| Sbjct 338396 GCGACCGATGGCGTCAATCTCGTCGATGAAGATGATACAGGGAGCGTTCTTACGACCCTC 338337 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || || ||||||||| | ||||||||| || |||||||| || || | | Sbjct 338336 GGCGAATAGGTCTCGTACACGCGAAGGTCCAACACCAACAAACATCTCGACAAATTCGGA 338277 Query 11793 GGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || |||||||| |||||| || ||||||||||| |||| || || | | Sbjct 338276 GCCACTCACACTGAA-GAAGGGCACTCCGGACTCACCAGCCGTGGCCTTGGCAAGCAACG 338218 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACT 11909 | ||||| |||||||| | ||||| | | ||| || || |||||||||||||| || Sbjct 338217 TTTTACCAGTACCAGGGGGTCCAGCCAAGATGGCACCTCGTGGGATCTTGGCACCTAGCT 338158 Query 11910 TC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGG 11968 || |||| | |||||||| ||| | |||| ||||| ||| || || ||| | Sbjct 338157 TCTCAAACT---TCTCAGGCTGCTTCAAGAAGCTCACAAATTCCATAATCTCAGTCTTCG 338101 Query 11969 CGGAGTCGATACCCTCAACATCGGTGAA 11996 | |||| ||| ||||||| | ||| Sbjct 338100 CCTCCTCGAGACCGGCAACATCTGCGAA 338073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588964323550800