Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20langsethiae_20[genbank_20GCA_5F001292635.1_202015-09-16]
1,586 sequences; 37,543,021 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq839 241 2e-58
seq700 113 5e-20
>seq839
Length=23613
Score = 241 bits (266), Expect = 2e-58
Identities = 565/844 (67%), Gaps = 19/844 (2%)
Strand=Plus/Minus
Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537
||||||||||| |||||| | | |||||| | ||| || || |||| ||||||
Sbjct 13348 TTGCAAACAGCGACCTCATCAGGAGCGCAGTACTCAATAATCTCAGTGCACAGGTTGGAG 13289
Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597
|| || || || | ||||||||||| ||||| |||||| |||||||||||||
Sbjct 13288 CTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGC 13229
Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656
||| | || | || ||||| ||||| | || |||||| || | ||| | | || | | |
Sbjct 13228 ATGAAAGGGTTTCCAGTCTCTGTCTGGGCCTCGAGAATGGCATACCAAAGCTTCTGAGCC 13169
Query 106657 TGG-TACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714
| | || | | ||| ||| | ||||| ||||||||| ||| || || || |||
Sbjct 13168 TTGATAGACTTGCGA---CCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCCTCGAAC 13112
Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774
|| ||||| ||| | ||||| || || || || || | ||||| |||||
Sbjct 13111 TCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCG 13052
Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834
||| || ||| || ||||||||||| || || || ||||| |||| || || ||
Sbjct 13051 CCATTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGGGCCAGGAACAGGTCA 12992
Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894
| | || |||| || | ||| ||||| ||| | ||||||||||| | || |||
Sbjct 12991 CGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACATCG 12932
Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGA 106948
|||||||| ||||| || |||| |||| || || ||| | | ||| | ||
Sbjct 12931 GCGTGCCAGGGCTCGAGGTAGATAGCGAAGGCACCAGGTCGCTT--GTTG-CCACCCTGG 12875
Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008
| || || || || ||| ||| || || || ||||| |||| | ||| | || |
Sbjct 12874 TCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGACACCGTTAGAAGTA 12815
Query 107009 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 107068
||||| ||||| ||| ||| |||| | | |||| || || ||||||
Sbjct 12814 CCATTGGTCCCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGGACGTTCAAGCCAATA 12755
Query 107069 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 107128
|| |||||| ||| || || ||||| | | || || | |||||||||| |||
Sbjct 12754 CCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCGATG 12695
Query 107129 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 107188
||||||||| | | | ||||||||| ||||| ||| || || ||||||||
Sbjct 12694 CTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCG 12635
Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCT 107246
||||| || || || | || ||| ||| | | |||| ||||| || ||||||||
Sbjct 12634 TTGAATAGTGTGGGGGAAGCATGAGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCT 12577
Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATT 107306
|||||||| || || || || || ||| || | || |||||||| | ||||| ||
Sbjct 12576 CCAAGACACGTTCGATATCATCACCCCAGATACCAACAGCAACACGCATGATCATGTGTT 12517
Query 107307 GGGG 107310
| ||
Sbjct 12516 GAGG 12513
>seq700
Length=246488
Score = 113 bits (124), Expect = 5e-20
Identities = 334/507 (66%), Gaps = 26/507 (5%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
||||| |||| |||||||| || ||||||||||| ||| |||| ||||| |||||
Sbjct 28275 TAGTCAGCAACACGCTTCTCGAAAAAGTTGGTCTTGCCACCAAGAGAGATGTTCTCCATG 28216
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099
||||| || || || | || || | | | | || | | | || |||
Sbjct 28215 AAGTCGAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGGGCGAC------GAGC 28162
Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159
|||||||| | || |||| ||||||| ||| | |||||||| || | |||
Sbjct 28161 AGACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTCGAGTTCATGCCTAGCAGA 28102
Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219
||| ||||| || || || |||| | |||||| ||| || || | | ||||
Sbjct 28101 GCACAAGGGAGAGCCTCAGTGAGGAACTTCTGCTCAATGGTAACGGCATCGGTGATGATG 28042
Query 117220 GCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276
| ||||| | | | ||| ||| || | || | || ||| || ||||
Sbjct 28041 TCCTGGATCATCTGCTTGCTGGCACGTCCCTTGAGGTGAGAGTGGAGGAGG--CA-GGCA 27985
Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336
|| || ||| |||||||| || || || || || || || ||||| || || |||
Sbjct 27984 AAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTAGAGAAAGTCAGACCGGGC 27925
Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACC 117395
|||||||| |||||||| | ||| |||| | ||| || | ||| ||||||||||||
Sbjct 27924 ATGAGACCACGCTTCTTGAGCCAGAAAATGGAAGCA-AAGGCACCGCTGAAGAAGATACC 27866
Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC---AAA 117452
||| ||| ||||| |||| ||| |||| ||| ||||| ||| || |||| |
Sbjct 27865 CTCAACAGCAGCAAAGGCAACAAGACGCTGGGCAAAGGA---AGAGTTCTTGTCCTGGAT 27809
Query 117453 CCATTTCATTGCCCATTTCGCCTTCTT 117479
|||| || ||||| | ||||||||
Sbjct 27808 CCATCGAATAGCCCAATCAGCCTTCTT 27782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589969103630640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |